Pseudomonas syringae CC1557: N018_17595
Help
Entry
N018_17595 CDS
T03014
Name
(GenBank) Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
psyr
Pseudomonas syringae CC1557
Brite
KEGG Orthology (KO) [BR:
psyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psyr03000
]
N018_17595
Transcription factors [BR:
psyr03000
]
Prokaryotic type
Helix-turn-helix
Other families
N018_17595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
HTH_30
HTH_7
AAA_5
HTH_23
AAA_2
Mg_chelatase
nSTAND6
HTH_11
HTH_20
HTH_22
HTH_3
HTH_17
HTH_10
Xre-like-HTH
MerR
AAA
DUF2089
HTH_24
HTH_29
AAA_7
dnstrm_HI1420
Phage_CP76
HTH_28
AAA_3
HTH_36
HTH_psq
TetR_N
PAS_7
HTH_Tnp_1
RWP-RK
RsmI_C
nSTAND3
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
AHG41924
UniProt:
W0MTM9
LinkDB
All DBs
Position
3911774..3913624
Genome browser
AA seq
616 aa
AA seq
DB search
MSQPSASLAHDIIIQDSWTRCRDFGLSHQTRPSFGQLPGAEVSRLLERHHGLVQTTHQEV
LPVYENILSNSNCLILLADPQGQLLKSWGTQRFVESSQTQGFMAGASWSERGTGTNAIGT
ALACEQAIHIEPDEHFLKANRFMTGSASPIFDADRRIIAVLDVSSDSFLPPSHTLGMVKM
MSQSVENRLILDQYRDSHFQLIFNTGLNNLDSQWAGLLIFDESGRILCANRRADNLLGAR
LSGVNIETLFKCPTLQLLSETEARPFALHAFGNNRFQCLLKRPTRHPLKLHSVQTVQMPA
VPKSLGLEAISLGDAKVEKAVLQAQRLLEKDIPLLIHGETGVGKEVFVKALHQASSRASQ
PLIAVNCAAIPAELVEAELFGYERGAFTGANQKGSIGLIRKADKGTLFLDEVGDMPMPVQ
ARLLRVLQERCVQPLGSSELYPVDIRLISATNRSLREQVLAGNFRQDLYYRISGLSIELP
PLRERTDQHALIQRIWERHREPHQRAGFCREVLELFERHPWPGNLRQLNSVIQVALALAD
EQPISSEHLPEDFLLDAHMDEECRDPVKTQEPERLASKEDLNQLFQAAGGNISQLAKRLG
VSRNTLYKRLREQRIV
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaacccagcgcttcgcttgctcacgacatcatcattcaggattcatggacccgc
tgtcgggacttcggtctcagccatcagacgcgcccatcgtttggccagttgccaggcgca
gaggtttcccgcctgctggaacgccaccacgggctggtgcaaaccacccatcaagaagta
ctgccggtctatgaaaacattctcagcaactccaattgcctgattctgctggccgaccct
cagggccagttgctcaagtcgtggggcactcagcgttttgtcgagtcttcgcagacccaa
ggcttcatggccggtgccagctggagcgagcgcggtacgggcaccaacgccatcggcacc
gcactggcctgcgaacaggctattcacatcgaaccggatgagcacttcctcaaggccaat
cgcttcatgacgggatctgcctcaccgatcttcgatgccgatcggcgcatcatcgccgtg
ctggacgtgtccagtgacagcttcctgccaccctcgcacacgctgggcatggtcaagatg
atgagccagtcggtagaaaaccgcctgatcctcgatcagtatcgcgacagccatttccag
ttgatcttcaataccggccttaacaacctcgacagccagtgggcgggtttgctgattttt
gatgaaagcggccggattctttgcgccaatcgtcgtgctgacaatctgttgggagcccgg
ctatcaggggtcaacatcgaaacactgttcaagtgcccgaccctgcaactgctcagtgaa
accgaggcccggccgtttgcgctgcatgcgtttggcaacaatcgctttcaatgcctgttg
aagcgtccgacgcgccatccgctcaaattgcacagcgttcagactgtgcagatgcctgct
gtgccaaaaagccttggtctggaagcaatcagcctgggcgacgcgaaagtcgagaaggcc
gtgttgcaagctcagcgcttgctggaaaaagacatcccgctgttgattcacggtgaaacc
ggtgtcggtaaagaggtcttcgtcaaggcgctgcatcaggccagctcacgcgccagccag
ccgttgatcgccgtcaactgcgcagcgatcccggcagaactggtcgaggcggagctgttt
ggctacgagcgaggtgcgttcaccggtgccaaccagaaaggcagcatcggcctgattcgc
aaggccgataaaggcacactgtttctcgatgaggtaggcgacatgccgatgcctgtacag
gcgcgattactgcgcgtgttacaggagagatgtgttcagccactgggcagtagcgagttg
tacccggtggacatacggctgatctctgccaccaatcgcagtctgcgcgagcaggtactg
gcaggaaattttcgtcaggatctttattaccggatcagcggcctgagtatcgaactgcca
cccttgcgcgagcgcaccgatcaacatgccttgatccagcgtatctgggagcgtcatcga
gagcctcaccagcgggcgggattttgcagagaagtgcttgagctgttcgaacgccacccg
tggccgggcaacctgcgccagctcaacagcgtgattcaggtcgcactggcgctggcagac
gagcaaccgatcagcagcgaacacctgccagaagactttctgctcgatgcacacatggat
gaggaatgccgggatcctgtaaaaacccaggaacccgagcgcctcgcctcaaaggaagac
ctgaaccagctgtttcaagcagcgggcggaaatatttcacaactggccaaacgcctgggg
gtaagccgcaatacgctatacaagcggttgcgggaacagcggattgtttag
DBGET
integrated database retrieval system
