Pseudomonas syringae CC1557: N018_17700
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Entry
N018_17700 CDS
T03014
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
psyr
Pseudomonas syringae CC1557
Brite
KEGG Orthology (KO) [BR:
psyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psyr03400
]
N018_17700
DNA repair and recombination proteins [BR:
psyr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
N018_17700
Archaeal homologous recombinant proteins
N018_17700
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AHG41944
UniProt:
W0MTP6
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All DBs
Position
3941366..3942610
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AA seq
414 aa
AA seq
DB search
MRLFHTSDWHLGQNLHGQERDFEHACFLTWLLARLAERQPDVLLIAGDIFDTVNPPVKAQ
ERLYDFIVNAHEQQPLLTIVMIAGNHDSGSRIELPAPLMRRLRTHALGRVMWLNDGVLDV
ERLLLPLPDAHGDIKAWCLALPFLRPAEVTGPTLGDDYLRGIGRVHELLIEAANTKRQPG
QALIAISHAHMAGGSVSEDSERSLIIGNAEALPASLFGPSITYVALGHLHKPQRVNGEER
IRYSGSPIPLSFSEIGYQHQILEINCEGETLTSVEPFLVPRAVNLQRLGPAPLAELLVQL
KALPNVDLLADPDRQPWLEVRVRLDEPQPDLRNQIETALQGKAVRLVRIGAEYAGKGSAD
GSDGDAALIELDQLSPQELFSRAWLDNYGSEVDEQTLTDFATLLREVQQESEQS
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgtttcacacctctgactggcacctgggtcagaacctgcacggccaggagcgc
gacttcgaacacgcttgcttcctgacctggttgctggcccgactggccgaacgacagcct
gatgtattgctgatcgcgggcgacatctttgacaccgtcaacccgccggtcaaagctcag
gaacgcctgtacgacttcatcgtcaacgctcacgaacagcagccgttgctgaccatcgtg
atgatcgctggcaaccatgactcaggctcacgcatcgaactgcctgccccactgatgcgc
cgtttgcgcacccacgcactgggccgagtgatgtggctgaacgatggcgtactggatgtc
gaacgcctgttgctgccgctgcccgacgcgcatggcgacatcaaggcctggtgcctggcg
ctgccgttcctgcgccccgccgaagtgaccgggccgaccctcggcgatgactacctgcgc
ggcatcggccgggtgcatgaactgctgatcgaagcagcgaataccaagcgccagccgggt
caggccctgatcgccatcagccacgcacacatggccggcggctcggtctcggaagactcc
gaacgcagcctgatcatcggtaacgccgaagccctgcccgccagcctgttcgggccgagc
atcacctatgtcgcgctaggccatttgcacaagccgcaacgggtcaatggcgaggagcgc
attcgttacagcggctcaccgatcccgttgtcgttttcggaaatcggctaccagcatcag
attctggaaatcaattgcgagggcgaaaccctgaccagcgtcgagccctttctggtccct
cgcgccgtcaacctgcaacgcctcgggcccgcaccactggccgaactgctggtgcagctc
aaagcgctgccgaatgtcgacctgctggccgatccggatcgtcagccctggctggaagtg
cgtgtgcgtcttgatgaaccgcaaccggacctgcgcaaccagatcgaaaccgcgctgcaa
ggcaaggccgtgcggctggtgcgcatcggcgctgaatacgccggtaaaggcagcgccgac
ggcagtgacggcgatgcggcactgatcgaactggaccaactcagcccacaggaattgttc
agccgcgcctggctggacaactacggcagcgaggtggacgaacagacccttacggatttc
gccacactgctgcgtgaagtccagcaggagagcgaacagtcatga
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