Pseudomonas syringae CC1557: N018_17705
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Entry
N018_17705 CDS
T03014
Name
(GenBank) chromosome segregation protein SMC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
psyr
Pseudomonas syringae CC1557
Brite
KEGG Orthology (KO) [BR:
psyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psyr03400
]
N018_17705
DNA repair and recombination proteins [BR:
psyr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
N018_17705
Archaeal homologous recombinant proteins
N018_17705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_23
SMC_N
AAA_21
AAA_29
ABC_tran
NDUF_C2
AAA_22
nSTAND3
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AHG41945
UniProt:
W0MXN7
LinkDB
All DBs
Position
3942607..3946254
Genome browser
AA seq
1215 aa
AA seq
DB search
MKILAIRLKNLASLAGPFELDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAIPR
LSNIGQSKVPDIDGDISTSDPRTLLRRGTGSGYAEVDFIGIDQRRYRARWETNRARDNAS
KKLQASRQTLTDLDSEQVLSNQSKREFEQLIESRLGLNFEQFTRAVMLAQSEFSAFLKAD
DKERSELLEKLTNTAIYSQLGRRAYSKSKEAEEALKTLTAQASNIVPLAPEQLAELEQRF
DDAQQQLKARQTQQRQLELKQQWLLELHRLRDEHLAAQESLTRAQQTWDELSSQRQTLAQ
LERLGPQRHRFARRVTLSAQLTPLAEQISQHQQQQTSLQSQQQQLETRRTEAQASLLMAQ
QTHGSAKPLLQQAFDAQNTLNHLAQELAKAADLHQHTGQLCAQGQASLQTLLDQQQQVTQ
RLERIAEQLQHSSELAPLAQAWSAWRDRLKSLTLIANRLKHGQHELPALQQRASEADQQL
TEQRNALELLYREADCEVEAVTEQLQILGSLLQDNRKQQRAFEELARLWASQQDVDRQLA
DLAQQQHSAQQQREQLNSEGLRVRDELAVAEQTLSVTRQLLERQRLARSASVEELRVQLQ
DDQPCPVCGSVDHPWHQPEALLESLTQHDDNEQASAQKAVDLLTEQRNQLREQVGGVIAR
QKELLRQHEQLMQRHQTLAPDFEGHPLAAQLLDRDAAKRDGWLSQQLSQLNEVIARDEQR
QEALLTLQKDAARLQQQLQAATDASQAAAGHVAEQLKQLDADQQRLEEELTAFTPLVSPQ
VLEGLRSDASATVMQLEQQVTQRLDQLKQQSEEQQEQHERQQKIEKEQIEQQARLQRQNE
LALDVTRLGEQQQARQQTLADLLGEHATAEHWQQALENAIEQARHTETSAAQALQGIQSQ
LIQLAAELKSGQQQQQALQQEVAELDAQISEWRAQHPELDDAALDALLTYDDAHLEQLRQ
QLQAAEKALEQASVLLQERDQRLQQHQAQHSDLSDNQQLAAELQVAQQQLAQSEQHCADL
RAELSEDQRRRNANSELQARITDANSEYLRWARLAALIGSAEGDRFRKIAQAYNLDLLVH
HANAQLRQLVRRYRLKRGGSVLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLRIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVGVISHVQEMHERIPVQIRV
RRQGNGLSTIEVGST
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgaagattcttgccattcgcctgaaaaacctcgcctcgctggccggcccgttcgaactg
gatttcaccgctgagccgctggccagtgccgggctgttcgccatcaccggcccgaccggc
gcgggcaaaagcaccttgctcgacgccttgtgcctggcgctgtttggggccatcccacgg
ctgagcaatatcggccagtccaaagtgccggacatcgacggcgacatcagtaccagcgac
ccgcgcacccttctgcggcgtggcaccggcagcggttatgccgaagtggatttcatcggc
atcgaccagcgtcgctatcgtgcgcgctgggagaccaatcgcgcgcgggacaacgccagc
aaaaagctccaggccagccgccagaccctcaccgatctggacagcgagcaagtcctcagc
aatcagagcaagcgtgaattcgaacagctgatcgagagccgtctgggcctgaacttcgaa
cagttcacccgggccgtgatgctcgcccagagcgagttcagcgccttcctcaaggccgat
gacaaggaacgcagcgagctgctggaaaagctgaccaacaccgcgatctacagccagctc
ggtcggcgcgcctacagcaagagcaaggaagccgaggaagcgctgaaaaccctgaccgcg
caggccagcaacatcgtgccgctggccccggaacaactggctgaactcgaacaacgcttc
gacgatgcccagcagcagctcaaggcccgtcagacgcaacagcggcaactggagctcaag
cagcaatggctgctcgaactgcatcgcctgcgtgacgaacacctcgcggctcaggaaagc
ctgacccgcgcgcagcagacctgggacgagctgagcagtcagcgccagacgcttgcgcaa
ctggaacgtctgggcccgcagcgtcatcgcttcgcccggcgtgtgaccctgagcgcgcaa
ctcaccccgctggccgaacagatcagccagcatcagcaacagcagacgtcgctgcagagc
caacagcaacaactggaaacccgccgcacagaagcgcaagccagcctgttgatggcccaa
caaacgcacggcagcgcgaaaccgctgctgcaacaagcgtttgacgcgcagaacaccctg
aatcacctggctcaggagctggccaaggcggctgacctgcatcagcacactgggcaactg
tgcgctcagggccaggccagcctgcaaaccttgctcgaccagcagcaacaggttacgcaa
cgccttgaacgcatcgcagaacagttgcaacacagcagcgagctggcgccactggcccag
gcatggagcgcatggcgtgaccgtctgaaatcactgacccttatcgccaaccggctcaag
cacggacagcacgaactgcctgccctgcaacaacgcgcaagcgaggccgatcagcaactg
accgagcagcgtaacgcactggaattgctctatcgcgaagcggactgcgaagtcgaggcg
gtgaccgagcagttgcagattctcggcagcctgttgcaggacaatcgtaagcaacaacgc
gcattcgaagaactggcgcgtctgtgggccagccaacaggacgtcgaccgtcagttggct
gatctggcacaacaacagcacagtgcccagcagcagcgcgaacagctcaacagtgaaggc
ctccgggttcgtgacgaactggccgtcgccgagcagacccttagcgtcacccggcaactg
ctggaacgtcagcgtctggcgcgcagtgccagcgttgaagaactgcgcgtgcagttgcag
gatgaccagccctgcccggtctgcggcagcgtcgaccatccttggcaccagccggaagcg
ttgctggaaagcctcacacaacacgacgacaacgagcaggccagcgcgcagaaggccgtg
gatctgctgaccgagcagcgcaatcagttgcgtgaacaggtgggcggcgtaatcgcccgg
cagaaagaactgctgcgccagcacgaacagctcatgcagcgtcatcagaccctggcgccg
gactttgaaggccacccgctcgcggctcaattgctggaccgcgacgccgctaaacgcgac
ggctggttgagccagcaactgagccagctgaacgaagtcatcgcccgtgacgagcaacgc
caagaggccttgctgaccctgcagaaagacgcggcccgcttgcagcagcagctccaggct
gcaacggatgccagccaggctgccgcaggccatgtcgccgaacagctcaagcaactggat
gctgatcagcaacgactggaagaggaactgacggcgttcacaccgctggtttcgccgcag
gtgctggaaggcctgcgcagcgacgcctcagcgacggtcatgcaactcgaacagcaagtg
actcagcggcttgatcagttgaagcagcaaagcgaggagcagcaggagcaacacgaacgc
cagcagaagatcgaaaaggaacagatcgaacagcaagcccgcctgcaacgccagaacgag
ctggcgcttgacgtcacccgtctcggcgaacagcagcaagcccgtcagcagacactggcc
gatctgctgggcgagcatgcgactgccgaacactggcaacaggcgctggaaaacgccatc
gaacaggcccgacacaccgaaacgtcggcggcccaggcacttcagggtattcaaagccag
ttgattcaactggctgccgagctcaagtccggccagcaacagcagcaagccttgcagcag
gaagtggcggaactcgacgcacagatcagcgagtggcgcgctcagcacccggaactggac
gacgctgcacttgacgccctgctgacttacgacgacgcgcacctcgagcaactgcgccag
caactacaggctgcggaaaaagcgcttgagcaggccagcgtattgctgcaggaacgtgac
cagcgcctgcaacagcatcaggcgcaacacagcgacctgagcgacaaccaacaactggcg
gccgagttgcaggtggcgcagcaacaactggcgcagagcgaacaacattgcgccgatctg
cgtgccgaactcagtgaagatcagcgccgtcgcaatgccaacagcgagcttcaagctcgc
atcactgacgccaacagcgagtacctgcgctgggcgagactggcagcactgatcggctcg
gccgagggcgaccggtttcgcaagatcgctcaggcttataacctcgacctgctggtccat
cacgccaacgcacaactcaggcaactggtgcggcgctaccgcctgaaacgcggcggcagc
gtgctcggactgctggtgatggataccgaaatgggcgacgaactgcgttcggtgcattcg
ctgtcgggcggcgaaacctttctcgtctcgctggccttggcacttggcctggcgtcgatg
gcctccagcaccttgcgcatcgaatcgctgttcatcgacgaaggcttcggcagccttgac
ccggaatcgctgcaattggcgatggacgcactggacggcttgcaggcccagggccgcaag
gtcggcgtgatctcccacgtacaggaaatgcacgaacggattccagtgcagatcagagtg
cgtcgtcagggcaacgggttgagtacgattgaggtgggcagcacatga
DBGET
integrated database retrieval system
