Pseudomonas syringae CC1557: N018_20055
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Entry
N018_20055 CDS
T03014
Name
(GenBank) transcriptional regulator
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
psyr
Pseudomonas syringae CC1557
Brite
KEGG Orthology (KO) [BR:
psyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psyr03000
]
N018_20055
Transcription factors [BR:
psyr03000
]
Prokaryotic type
Helix-turn-helix
Other families
N018_20055
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Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
HTH_31
HTH_24
HTH_AsnC-type
CHRD
Motif
Other DBs
NCBI-ProteinID:
AHG42390
UniProt:
W0MYX2
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Position
4438828..4439694
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AA seq
288 aa
AA seq
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MDRVRNLLEQIQGRLDELNKAERKVAEVILLNPQMATRLSIAALAQAAKVSEPTVNRFCR
SFNVSGYPELKLQLAQSLASGAAYVSRAVEADDNPEAYTQKIFGSAIASLDSACQQLDPA
LVSKSVDMLIQARQIHFFGLGASAPVALDAQHKFFRFNLAVTAHADVLMQRMIASVAHTG
ELFVIISYTGRTRELVEVARIARANGASVLGLTAAGSPLAQASTVSLNIPLPEDTDIYMP
MTSRIIQLTVLDVLATGMTLRRGVDFQPHLRKIKESLNDSRYPIEDQG
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcgtaagaaacctcctggagcaaatccagggccgactcgatgagttgaacaag
gccgagcgcaaggtggccgaagtgattctgctcaatccgcagatggcgactcgcctgagc
attgccgcgcttgctcaggctgccaaggtcagcgaaccgacggtcaaccgtttctgccgc
tcgttcaacgtcagcggttatccggagctcaagctgcaactggcgcagagcctggccagc
ggcgcagcctatgtcagccgcgcagtggaagcagacgacaaccctgaagcctacacccag
aagattttcggcagcgccattgcgtcgctggacagcgcctgtcagcaactggacccggca
ctggtcagcaagtcggtggacatgctgatccaggcgcggcagatccactttttcgggctg
ggcgcttcggcgccggtggcactcgatgcgcagcacaaattcttccgcttcaacctggcg
gtcacggcacatgctgacgtcttgatgcagcggatgattgcctcggtagcgcacacgggt
gaattgttcgtgatcatttcctacaccggccgcacccgcgagctggtggaagtggcacgg
atagcacgggccaacggcgcttcggtgctgggcctgacggccgcaggttcaccgctggct
caggcgagcaccgtgagcctgaatattccgctgccggaagacaccgatatctatatgccg
atgacctcgcggatcattcaactgacggttctggacgtactggccaccggtatgaccctg
cgccgcggcgtcgacttccagccgcacctgcgcaaaatcaaggaaagcctgaacgacagc
cggtatccgatcgaggatcagggctga
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