Pseudomonas syringae CC1557: N018_21480
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Entry
N018_21480 CDS
T03014
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
psyr
Pseudomonas syringae CC1557
Pathway
psyr00550
Peptidoglycan biosynthesis
psyr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psyr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
N018_21480
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
psyr01003
]
N018_21480
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psyr01011
]
N018_21480
Enzymes [BR:
psyr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
N018_21480
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
N018_21480
Glycosyltransferases [BR:
psyr01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
N018_21480
Peptidoglycan biosynthesis and degradation proteins [BR:
psyr01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
N018_21480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
UvrB_inter
PBP1_TM
Motif
Other DBs
NCBI-ProteinID:
AHG42654
UniProt:
W0MVP0
LinkDB
All DBs
Position
complement(4748858..4751179)
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AA seq
773 aa
AA seq
DB search
MTRSRTSRSPKKQPPRSLHKWLGWALKLGIVGLVLLGGLAIYLDAIVQEKFSGKRWTIPA
KVYARPLELFVGQKLSRDDFLIELDALGYRRESVANGPGAAAVNGNTVDLNTRGFQFYEG
TDAAQQVRVRFSGDYVADLSSGNGAKLAVARLEPLLIGGLYPKNLEDRILIKLDQAPPYL
LDGLVAVEDRDFYHHFGVSPKSIARAIWVNTSQGQMRQGGSTLTQQLVKNFYLTNERSLT
RKLTEAMMAVLLEIHYSKQEILEAYLNEVFVGQDGQRAVHGFGLASQYFFSQPLSELKIH
QVAMLVGLVKGPSFYNPRRNPERALERRNLVLDLFEQQGVATPEVVAAAKKLPLGVTKTG
TLADSSFPAFLDLVKRQLREDYRDEDLTEEGLRIFTSFDPILQMKSQAAIDDTFKKLAGR
KGVDEVEAGMVVTNPETGEVQALIGGREAGFSGFNRAIDAVRPIGSLVKPAIYLTALERP
SQYTLTSWIADELFQVKGADGQIWKPQNYDRKSHGNIFLYQGLAHSYNLSTAKLGLDLGI
PNVFKTLAKLGVTREWPAYPSMLLGAGGLSPMEVATMYQTIASGGFNTPMRGIRSVLTAE
GEPLKRYPFKIEQRFDPGAIYLVQNAMQRVMREGTGKSVYNVLPSSLNLAGKTGTSNDSR
DSWFAGFSQDLLAVVWMGRDDNGKTPFTGATGALQVWTSFMRKADPLPLDMAMPDNVVLA
WVDAQTGQGSDASCPNAVQMPYIRGSEPQPGATCGGAPAPATEVMDWVKGWLN
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgactcgatcccgcacctctcgttcccccaaaaagcaacctccccgcagcctgcacaag
tggctgggctgggcgttgaagcttggtatcgtcggcctggttctgctgggcggcctggcg
atttatctcgatgccattgttcaggaaaaattctccggcaagcgctggaccattccggcc
aaggtctacgctcggccgctggagctgttcgtcgggcaaaaactcagccgcgatgacttc
ctcatcgagctggacgctctgggctatcgccgcgaaagcgtggcgaacgggcccggcgcc
gcagcggtgaacggcaataccgtcgatctcaatacgcgcggctttcagttctacgaaggc
actgacgcagcgcagcaggttcgcgtgcgcttttctggtgactatgtagccgacctgtcc
tcgggcaacggcgccaagcttgcagtcgcacggcttgagcctctgctgatcggcgggctg
tatccgaaaaatctcgaagaccgcattctgatcaagctcgatcaggcaccgccgtatctg
ctcgacgggctggtggcggtcgaggaccgggatttctatcaccactttggtgtgtcgccc
aaatccatcgcccgggctatctgggtcaacacctcccaagggcagatgcgccagggcggc
agtacgctgactcaacagttggtcaagaacttctacctgaccaacgagcgcagcctgacc
cgcaaactgaccgaagccatgatggctgtcttgctggagattcattacagcaagcaggaa
atcctcgaagcgtatctcaacgaggtatttgtcggtcaggacggccagcgtgctgtccac
ggtttcggcctggccagtcagtatttcttcagtcagccgctgtccgagctgaaaatccat
caggtggcgatgctggtcggtctggtcaaagggccgtctttctataacccgcgtcgcaat
cccgagcgcgcactggaacgccgtaatctggtgctcgacttatttgagcagcaaggtgtt
gccacgccggaagtggtcgccgctgcgaaaaaactgccactgggtgtgaccaaaaccggc
acgcttgccgacagttctttcccggcgtttcttgatctggtcaaacgtcagttacgtgaa
gactatcgtgatgaagacttgaccgaagagggcctgcggatcttcaccagtttcgatccg
atcctgcagatgaaatcccaggccgccatagacgatacgttcaaaaagctcgccggacgc
aagggtgttgatgaagtagaagcgggcatggtcgtcaccaatccggagaccggtgaagtg
caggcgctgatcggtggacgtgaagccgggttctcgggtttcaaccgggcgatcgacgcg
gtgcggccgattggctcgctggtcaagccggctatttatctgacggcgctggagcgcccg
agccaatacacgctcaccagttggatcgccgacgagctgttccaggtcaagggcgccgac
ggtcagatctggaagccgcagaattacgatcgcaagtcccacggcaatatctttctgtat
caggggctggcgcattcctacaacctgtcgaccgccaagctgggccttgatctgggtatt
ccgaatgtgttcaaaacgctggccaagctgggcgttacccgcgaatggcctgcttatcct
tcgatgttgctgggggcaggcggcttgagtccgatggaggtcgccaccatgtaccagacc
atcgccagtggcgggttcaatacgccgatgcgcggtatccgcagcgtgttgaccgctgaa
ggtgaaccgctcaagcgctatccgttcaagatcgagcagcgctttgatccaggtgcgatt
tatctggtacagaatgcgatgcagcgcgttatgcgtgaaggtacgggcaaatctgtttac
aacgtcttgccgagctcgttgaacctggcgggcaagaccggcaccagtaacgattcccgc
gacagctggtttgccggtttcagtcaggatctgctggcagtggtctggatgggccgcgac
gataacggcaagacaccgttcaccggtgctaccggggccttgcaggtctggacgagcttc
atgcgcaaggctgatccgctgccgctggacatggcaatgccggacaacgtcgtgctggcg
tgggtggatgcgcagaccggccagggttcggacgccagctgcccgaatgcagtgcagatg
ccgtatattcgcggcagtgagccccagcccggcgcgacatgcggcggcgctccagcacct
gcgactgaggtgatggactgggtcaagggttggttgaactag
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