Pseudomonas syringae CC1557: N018_21540
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Entry
N018_21540 CDS
T03014
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
psyr
Pseudomonas syringae CC1557
Pathway
psyr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N018_21540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psyr03019
]
N018_21540
Enzymes [BR:
psyr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
N018_21540
Messenger RNA biogenesis [BR:
psyr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
N018_21540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AHG42665
UniProt:
W0MZL3
LinkDB
All DBs
Position
4764178..4765581
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AA seq
467 aa
AA seq
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MLKKLFQSFRSPLRKPQQHTRTTPEVLNSGQHSLQRGQFSRYAVNIVERLQNAGYQAYLV
GGCVRDMMLNITPKDFDVATSATPEQVRAEFRNARIIGRRFKLVHIHFGREIIEVATFRA
NHPQDDEEEDSNQSSRNESGRILRDNVYGTLEEDAQRRDFTINALYYDPVSERVLDYANG
VHDIRNRLIRLIGDPEQRYKEDPVRMLRAVRFAAKLDFGIEKHSAQPIRALAPMLRDIPS
ARLFEEVLKLFLSGYAAPTFEMLVDLELFDPLFPASSKALEYNPTYTHTLISSALLNTDL
RIKQNKPVTPAFLFAALLWPALPAKVLRAQERGMPPIAAMQDAAHELIIEQCQRIAIPKR
FTLPIREIWDMQERLPRRSGKRADLLLDNSRFRAGYDFLLLRESAGEQTDGLGQWWTDYQ
DCNESERRDMIRDLSNKPEAAGTAPRKRRRTSGAKRKRTSGETQSGE
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagaagttgttccagtcatttcgttccccattgcgcaaaccgcagcaacacacg
cgtaccacgcctgaggtgctcaacagcggccagcactcgctgcagcgcggccagttcagc
cgctatgccgtcaatattgtcgagcgcctgcaaaacgctggttaccaggcctatctggtc
ggtggctgcgtacgcgacatgatgctcaacatcacgcccaaggatttcgacgtcgccacc
agcgccacgccagaacaggtaagggccgaattccgcaatgcgcggatcattggccgccgg
ttcaaactggtgcatatccacttcggtcgcgaaatcatcgaagtcgcgacgttccgcgcc
aatcatcctcaggatgacgaagaagaggacagcaatcagtcttcgcgtaatgaaagcggc
cgcatcctgcgtgacaacgtatacggtacgctcgaagaggacgcccagcgtcgcgacttc
acgattaatgcgctgtattacgatccggtcagcgagcgtgttctggattacgccaacggc
gtgcacgacatccgtaatcgcctgatccgcctgattggcgatccggaacaacgctataag
gaagacccggtgcgcatgctgcgcgcggtacgcttcgccgccaagctggatttcggtatc
gagaagcacagcgcccagccgatccgcgcactggcgccgatgctgcgtgatattccttcg
gcgcgtctgttcgaagaagtgctcaaactgttcctctccggatacgccgcgccgaccttt
gaaatgctggtcgacctggaactgtttgatccgttgttcccggccagttccaaggcgctg
gaatacaacccgacgtatacccatacactgatcagcagtgccctgctcaataccgacctg
cgcatcaagcagaacaaaccggtcacaccggcgttcctgtttgccgccctgctctggcct
gcgctgccggccaaagtgctgcgtgcgcaggagcgtggcatgccgccgattgcggccatg
caggacgctgctcacgaactgatcatcgaacaatgccagcgcatcgcgatcccgaagcgt
ttcacgctgccgatccgcgaaatctgggacatgcaggaacgcctgccacgtcgctccggc
aaacgcgccgacctgctgctggataattcgcgcttccgtgccggttacgacttcctgctg
ctgcgtgaaagcgcgggcgagcagactgatggtctcggtcaatggtggaccgactatcag
gattgcaacgaaagcgaacgccgcgacatgattcgtgacctgagcaacaagccggaagcc
gcaggcactgcgccgcgcaaacgtcgtcgtaccagcggtgccaagcgcaagcgcaccagc
ggcgagacgcaaagcggtgaatga
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