Pseudomonas syringae CC1557: N018_24350
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Entry
N018_24350 CDS
T03014
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
psyr
Pseudomonas syringae CC1557
Pathway
psyr03030
DNA replication
psyr03410
Base excision repair
psyr03420
Nucleotide excision repair
psyr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
N018_24350
03410 Base excision repair
N018_24350
03420 Nucleotide excision repair
N018_24350
03440 Homologous recombination
N018_24350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psyr03032
]
N018_24350
03400 DNA repair and recombination proteins [BR:
psyr03400
]
N018_24350
Enzymes [BR:
psyr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
N018_24350
DNA replication proteins [BR:
psyr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
N018_24350
DNA repair and recombination proteins [BR:
psyr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
N018_24350
NER (nucleotide excision repair)
GGR (global genome repair) factors
N018_24350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
Obc1_cap
Motif
Other DBs
NCBI-ProteinID:
AHG43196
UniProt:
W0N299
LinkDB
All DBs
Position
5415911..5418676
Genome browser
AA seq
921 aa
AA seq
DB search
MTQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRRQYPDSPLAVVFD
AKGGTFRDALYTDYKANRPSMPDDLRVQVDLLHACVKGMGYPFLCVEGVEADDVIGTLAR
SSAAADRPVVISTGDKDMAQLVDGHITLVNTMTGSVLDVAGVKEKFGVGPEHIIDYLALM
GDKVDNIPGVPGVGEKTAVGLLVGVGGGIKELYDNLDKVATLPIRGAKTLAAKLEEHREM
AFLSYELATIKIDVPLDIELDQLHCGEPDRDTLMELYAELEFKSWIEDLQRDAKRAGQEL
AVEEPTVAAKEAAYEVILEQAQFDAWLKKLQAAPLFAFVTQSNGTDAQRAQLVGLSFAIQ
THEAAYIPLTHSYMGVPQQLDRDTVLKTLKPLLEDPGKIKVGQHAKFAINLLANCAVDGD
QTQGIDLQGVRFDTILESYVLDSTATRHDRDSLVAKYLTHTPINFQDIAGKGAKQLTFDQ
IALEQAGNYAAEEADLTLRLHEVFDARLAAIPTLQPVLNDIEMPLVPVLARIERQGALVD
ANLLGIQSVELGDKMTALEREAFAIAGEEFNLGSPKQLGVILYEKLGMPILSKTATGQPS
TAEAVLAELAEQDFPLPKVLMQYRSMSKLKSTYTDRLPEQINPRTGRIHTSYHQAVAVTG
RLSSSDPNLQNIPIRTAEGRRIRQAFVAPKGYKLLAADYSQIELRIMAHLAKDEGLLHAF
RNDLDVHRATAAEVFGVELDGVTNDMRRSAKAINFGLIYGMSAFGLAKQIGVDRKQSQAY
VDRYFARYPGVLDYMERTRAQAAEQGFVETIFGRRLYLPDINAKNPSLRKGAERMAINAP
MQGTAADIIKKAMVAVNGWLDESGLDARVILQVHDELVLEVREDLVDQISEQIRPHMSGA
AELAVPLLVEVGVGNNWDEAH
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgacccaagcgccgctcgtcctggtagacggttcttcttacctctaccgtgccttccac
gcactgccccccctgaccacgtccaaagggctgccgaccggcgccgtcaaaggcgtgctg
aacatgctcaaaagcctgcgccgccagtatccggacagcccgctcgcggtggttttcgac
gccaagggcgggacgttccgtgacgcgttgtacaccgactataaagccaaccggcccagc
atgccggacgatctgcgtgtgcaggtcgatctgctgcatgcctgcgtcaaaggcatgggc
tatccattcctgtgcgtggaaggcgtcgaagcggatgacgtgatcggcaccctggcgcgc
agcagcgcggcggcggatcggccagtggtcatttccactggcgacaaggacatggcgcag
ttggtcgacgggcatatcaccctggtcaacaccatgaccggcagcgtgctcgacgtggcg
ggcgtgaaagagaaattcggcgtcggcccggagcacatcatcgattacctcgcgctgatg
ggcgacaaggttgacaacattcccggcgtgccgggcgtcggtgagaaaactgccgtcggc
ctgctggtcggtgtcggcggcgggataaaggagctttacgacaacctcgacaaggtcgcg
accctgccaatccgtggcgccaagaccctggccgccaagctcgaagaacaccgcgagatg
gctttcctgtcctacgaactggcaaccatcaagatcgacgtgcctctggacatcgagctg
gatcagttgcactgcggcgagccggaccgcgacacgctgatggagctgtacgccgagctg
gaattcaagagctggatcgaagacctgcaacgcgacgccaagcgtgccggacaggaactg
gcggttgaagaaccgacagtcgcagcaaaggaagcggcctatgaagtcatccttgaacaa
gcccagttcgatgcctggctgaaaaagcttcaggcggcgccgctttttgctttcgtcacc
cagagcaacggcaccgacgcccagcgtgcacaactggtcggtttgtctttcgccatccag
acccacgaagcggcttatatcccgctgactcactcgtacatgggcgtgccccagcagctg
gaccgcgacacggtgctcaagacgctcaaaccgttgctggaagacccgggcaagatcaag
gtcggccagcacgccaaattcgccatcaacctgcttgccaactgcgcggtcgatggcgat
cagacgcagggcatcgatttgcagggcgtcaggttcgacaccattctggaatcctacgtt
ctcgattccactgcaacgcgtcacgaccgcgacagtctggtggccaagtacctgacgcac
acgccgataaactttcaggacatcgccggcaaaggtgccaaacagctgaccttcgaccag
attgccctggagcaggcgggcaactatgccgctgaagaagccgatctgaccctgcgcctg
catgaagtcttcgacgcgcgtctggcggcaatcccgaccttgcagccggtgctcaacgat
atcgaaatgccgctggtgcccgtactggcccgtatcgagcgccagggcgcgctggtcgac
gccaacctgctgggcatccagagcgttgaactgggcgacaagatgaccgcactggagcgc
gaagccttcgccattgccggtgaagagttcaacctcggctcgcccaagcagctcggggtg
attctctatgaaaaactcggcatgccgatcctcagcaaaaccgccaccggccagccgtcg
actgccgaagcggtgctggccgaactggccgagcaggatttcccgctgcccaaggtgctg
atgcagtaccgctcgatgagcaagctcaagagtacgtacaccgaccgtctgcccgagcag
atcaacccgcgcaccggacgcatccatacctcttaccatcaggcggtagcggtgacaggc
cgtttgtcctccagtgatccgaacctgcagaacatcccgattcgtaccgctgaaggccga
cgcatccgccaggcgttcgtggcgcccaagggttacaaactgctggcagcggactattcg
cagatcgaactgcggatcatggcgcatctggcgaaggacgaaggcttgctgcacgcgttc
cgcaacgatctggacgtgcaccgggcgacggcggcggaagtcttcggcgtcgagctggac
ggcgtcactaatgacatgcggcgcagcgccaaggcgatcaacttcggcctgatctacggc
atgagcgcgttcggcctggccaaacagatcggtgtcgaccgcaagcaatcacaggcctac
gtagaccggtacttcgctcgctaccccggcgtactcgactacatggagcgcacccgcgcc
caggccgccgagcagggctttgtcgaaaccatcttcggtcgccgcctgtacctgcccgac
atcaacgccaagaacccgtccctgcgcaagggcgcggagcgcatggcgatcaacgcgcca
atgcaaggcaccgccgcagacatcatcaaaaaagcgatggtggcggtgaacggctggctg
gatgagtcggggctggatgcgcgcgtcatcctgcaggtacacgatgaactggtgctggaa
gtgcgcgaagacctggttgatcagatcagcgaacagatccgtccgcacatgagcggggca
gcagaattggccgtgccactgctggtggaagtgggtgtgggcaacaattgggacgaggca
cattga
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