Pseudomonas syringae CC1557: N018_25025
Help
Entry
N018_25025 CDS
T03014
Name
(GenBank) EvpB family type VI secretion protein
KO
K11900
type VI secretion system protein ImpC
Organism
psyr
Pseudomonas syringae CC1557
Pathway
psyr02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
psyr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
N018_25025
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psyr02044
]
N018_25025
Secretion system [BR:
psyr02044
]
Type VI secretion system
Imp/Vas secretion system core components
N018_25025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
TssC
Motif
Other DBs
NCBI-ProteinID:
AHG43317
UniProt:
W0MY04
LinkDB
All DBs
Position
5564933..5566435
Genome browser
AA seq
500 aa
AA seq
DB search
MTDKQNATQQDGALVEVENFAPQSSLLDSIISESRVARSETERTRTRDLIGELVAQVLEG
EMTPSKDLIAVLDARIAEIDAMLSEQMNEIMHAREFQQLEASWRGLKYQVDQTETSTTLK
IHLLNASKKDLVRDLKASSEFDQSALFKKIYEEEYGTFGGAPFGMLLGDYEFNRSPEDMY
LLEEISHVAAAAHAPFISAASAELFGWDSFTDMAGPRDLAKIFDTVEYAKWKSFRASEDS
RYVGLTLPHVLGRLPYGPDTTPVEEFNFVESVDGRDHNKYLWMNAAYALGTRVTDAFSRY
GWCVAIRGVEGGGLVEGLPTHTFKTDDGEIALKCPTEIAITDRREKELSDLGFIPLVHCK
GTDYAAFFGTQSTQKQKHYNTDIANANARLSAQLQYIFATSRIAHYMKAIMRDKIGSFAS
RKDVELFLNKWLSSYVLLDDTASQEAKAKFPLREARAEVFEVPGKPGVYKAVTYLRPHYQ
LDELTASLRLVAELPQSTRG
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataagcaaaacgcgactcagcaggacggcgctttggtagaagttgagaacttc
gccccgcaatcctctttgctcgacagcatcatttccgaaagccgcgtcgcgcgctccgaa
accgagcgtacccgcactcgcgatctgatcggcgaacttgtggcgcaggtcctggaaggc
gaaatgacgccaagcaaggatctgattgccgtgcttgacgcgcgcatcgctgaaatcgat
gcgatgctctccgagcaaatgaacgagatcatgcatgcccgtgaattccagcaactggaa
gcgtcctggcgcggcctgaaatatcaggttgaccagacagagaccagcaccacgctgaag
attcatttgctcaacgcttcaaaaaaagatctggttcgagacctcaaagcctcgtccgag
tttgaccaaagcgcactcttcaaaaagatctacgaagaagagtacgggaccttcggtggt
gcgccgttcggcatgttgctgggtgactacgagttcaaccgcagccctgaagacatgtac
ctgctggaagagatctcccatgttgccgctgcagcccatgcaccgttcatttcggcagcc
tcggctgaactgttcggctgggactcattcaccgacatggctggtccgcgcgatctggcg
aagatcttcgacactgtcgagtacgccaaatggaagtccttccgtgcttccgaagactcc
cgttatgtaggcctgactctgccgcacgtgctgggtcgcctgccttacggcccggatacc
acgcccgtcgaagaattcaactttgtcgaaagcgtcgatggccgtgaccacaacaaatat
ctgtggatgaacgctgcctacgcactgggcactcgcgtaactgacgcgttctcccgctac
ggctggtgcgttgcgattcgtggtgttgaaggcggtggcttggttgaaggcttgccgact
cacacattcaagaccgatgacggcgaaatcgcgctgaaatgcccgactgaaattgccatc
accgatcgtcgtgagaaagagctgtcggacctgggcttcattccgctggtgcactgcaaa
gggactgactatgccgctttctttggcactcagtcgacccagaagcaaaagcactacaac
actgacattgccaacgccaacgcccgtctctcggcgcagttgcagtacatcttcgccacc
tcgcgtatcgctcactacatgaaagcgatcatgcgcgacaagattggcagttttgcttcc
cgcaaggatgtcgaactgttcctcaacaagtggctgtccagctatgtgttgctggatgac
acagccagtcaggaagccaaggccaagttcccgctacgcgaggcgcgtgccgaagtgttc
gaagtacccggcaagcctggcgtctacaaggccgtgacctacctgcgtccgcattatcaa
ctggatgaactgacggcttcgttgcgtttggtcgccgaattaccccaatcgactcgcggc
taa
DBGET
integrated database retrieval system
