Pseudomonas syringae CC1557: N018_25055
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Entry
N018_25055 CDS
T03014
Name
(GenBank) type VI secretion protein
KO
K11893
type VI secretion system protein ImpJ
Organism
psyr
Pseudomonas syringae CC1557
Pathway
psyr02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
psyr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
N018_25055
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psyr02044
]
N018_25055
Secretion system [BR:
psyr02044
]
Type VI secretion system
Imp/Vas secretion system core components
N018_25055
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
AHG43323
UniProt:
W0N212
LinkDB
All DBs
Position
5573189..5574532
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AA seq
447 aa
AA seq
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MSKQSRVMWSEGMFLLPQHFQYQDEFHQHQLAESTLRSTPFHWGVQTLEVDVEALATGSL
QLKRLKLVFPDGSLYDAPQHDPLPAARDLKNLIKGGEIKVYAALKLPEPFGLNYVEDGQE
QKSARRFRKQFDTLPDLNEGDLENEITSLRLNVVMLVDGDSLDGYSYCPIARLARNNIGG
FNLDAHFVHPTLHVGTHETLVGLGRRLISVLQAKSKALSGRRRERADQIAEFGSSDVTLF
WLLNTVNRAYPQLAHLLAHPRLHPERLYLFLAELAGGLLTFSLDTQLTDIPDYDHQDPAA
SLVKLDELVRLLLENVIPNQCIVINLSQVRPSYWQGQLLDPRLTEADFYISVHADMPGSS
LLELVPRAFKVGSPEDIEVVVNSAMPGVTLNHSTRLPNAIPVRLDNHYFSIEPHGRVYER
MMEAQAISFYAPSAFTNLKLELLAVLK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaacaaagccgcgtgatgtggtcggaaggtatgttccttttgccgcaacatttc
caatatcaggatgagtttcaccaacatcagcttgctgagtcgacactgcgttccacgccc
tttcactggggtgtgcaaacgctggaagtcgacgtagaggcgctggcgaccgggtccctg
caactgaagcgcctgaaactggtgttcccggacggcagtctttacgacgcgccgcagcac
gacccgctgcccgccgcgcgcgacctgaaaaacctgatcaaaggcggagagatcaaggtt
tatgcagcgctgaaactgcctgagccttttgggctgaactacgttgaagacggccaggaa
cagaaaagtgcccgtcgctttcgtaaacaattcgacacgctgccggacctcaacgaaggc
gatctggaaaacgagatcaccagcctgcgcctgaatgtggtgatgctggtcgatggcgac
agtctggacggttacagctactgcccgattgcgcgactggcgcgtaacaacatcggcggc
ttcaaccttgatgcgcactttgtgcatccgaccttgcatgtgggcactcacgaaacactg
gtcggcctcggcaggcgcctgatcagcgtgctgcaagccaagagcaaggcgctctcgggc
cgccgccgcgagcgtgccgaccagatcgccgagttcggctccagcgacgtcaccctgttc
tggctcctgaacaccgtcaaccgtgcctatccgcaactggcccatctgctggcgcatcca
cgtctgcacccggagcgcctgtatctttttctggcggaactggcgggtggcctgctgaca
ttctcgctggacacgcaactcaccgacattccggattacgatcatcaggatccagccgcc
tcgttggtaaaactcgacgagctggttcgtctgctgcttgaaaacgtgatcccgaaccag
tgcattgtcatcaacctgagccaggtcaggccttcgtactggcagggccagttgctggat
ccgcgtcttaccgaagcggacttttacatctcggtacacgccgatatgcccggctccagc
ctgctggaactggtgcctcgtgcgttcaaggtcggttcgccggaagacatcgaagtggtc
gtcaacagcgccatgccgggcgtcacactgaaccactcgacacgcctgccaaatgcaatt
ccggtgcgtctggacaatcattatttctccatcgagcctcatgggcgggtgtacgagcga
atgatggaagcgcaggccatttccttctacgcgcccagcgcgtttaccaatctcaagctt
gaactgttggcggtgcttaaatga
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