Pseudomonas syringae CC1557: N018_25575
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Entry
N018_25575 CDS
T03014
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psyr
Pseudomonas syringae CC1557
Pathway
psyr03420
Nucleotide excision repair
psyr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
N018_25575 (uvrD)
03430 Mismatch repair
N018_25575 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psyr03400
]
N018_25575 (uvrD)
Enzymes [BR:
psyr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
N018_25575 (uvrD)
DNA repair and recombination proteins [BR:
psyr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
N018_25575 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
N018_25575 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
Viral_helicase1
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AHG43417
UniProt:
W0MYD1
LinkDB
All DBs
Position
5693051..5695234
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AA seq
727 aa
AA seq
DB search
MRDDLSLLLNSLNDAQRQAVAASLGRQLVLAGAGSGKTRVLVHRIAWLMQVEQASPHSVL
SVTFTNKAAAEMRHRIEQLMGISPAGMWVGTFHGLAHRLLRAHWQEAGLVQTFQILDSDD
QQRLVKRVMRELGLDEQRWPARQAQWFINGQKDEGLRPKHIQASGDLFLTTMKSVYEAYE
VACQRAGVIDFSELLLRALDLWRDNPGLLAHYQRRFRHVLVDEFQDTNAVQYAWLRLLAQ
GGDSLMVVGDDDQSIYGWRGAKIENIHQYSSDFPDTEVIRLEQNYRSTASILKAANALIV
NNSGRLGKELWTDVGDGELINLYAAFNEHDEARYVVETIESALKTGISRNDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYMRLLEGRGNDAALERVINVPARGI
GEKTVEAIREHARHADVSMWEAMRLLVANKGLTGRAATALGGFIELIENLSAKVMEMPLH
LMTQTVIEQSGLITYHEQEKGEKGQARVENLEELVSAARAFENHESDEELTPLAAFLGHA
SLEAGDTQAQEHEESIQLMTLHSAKGLEFPHVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMTQLVMTYAETRRLYGSETYNKVSRFVREIPPALIQEVRLSNSVSRPFGGTP
KFNSSSLFNGTGIPDTEFTMGQRVQHAVFGEGVILNFEGAGAQARVQVNFADGSKWLMMG
YAKLVAL
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgatctctctcttcttctgaattccctaaacgatgcccagcgtcaggccgta
gcggcctcactgggtcgtcagttggttctggccggtgctggctccggtaaaacccgtgtg
ctggtgcatcgcatcgcctggctgatgcaggtcgagcaagcctccccgcattcggttctg
tcggtgactttcaccaacaaggcggctgcagagatgcgccaccgtatcgaacagctgatg
ggcatcagcccggccggcatgtgggtgggcaccttccacggtctggcgcaccgcctgctg
cgtgcgcactggcaggaagccgggctggtgcagaccttccagattctcgacagcgatgac
cagcagcgtctggtcaagcgcgtgatgcgcgaactggggctggacgaacagcgctggcct
gcacgtcaggcccagtggttcatcaatggtcagaaagacgaaggcctgcgcccgaaacat
attcaggccagcggcgatctgttcctgaccaccatgaaaagcgtttacgaagcctacgag
gtcgcttgccagcgggcaggcgtcatcgacttctccgagctgttgctgcgcgcactggac
ctatggcgcgataacccgggcctgctcgcgcattatcagcgccgcttccgtcatgtactg
gtcgacgagttccaggacaccaacgccgtgcagtacgcctggttgcgtctgctggctcag
ggcggcgacagcctgatggtggtcggcgacgacgatcagtccatctatggctggcgtggc
gcgaagatcgagaacattcaccagtactcttccgacttcccggacaccgaagtgatccgc
ctggagcagaattaccgctccacggcgagcatcctcaaggccgccaacgccttgatcgtc
aacaacagcgggcgtctcggcaaggaattgtggaccgatgtcggtgacggcgagctgatc
aatctgtacgccgccttcaacgaacacgacgaagcacgctacgtggtcgagaccatcgaa
agcgcgctgaaaactggtatatcgcgcaacgacattgccattctgtaccgctccaacgcc
cagtcgcgagtgctggaagaagccctgctgcgcgaacgcatcccgtatcgcatctatggc
gggcaacgattcttcgaacgcgccgaaatcaagaacgccatggcgtacatgcgcctgctg
gaaggccgtggcaacgatgcggcactggagcgggtcatcaacgttccggcacgcggcatc
ggtgaaaagaccgttgaagcgattcgcgagcatgcgcgtcatgccgacgtctcgatgtgg
gaagccatgcgtctgctggtcgccaataaaggcctgaccggtcgcgccgccacggctttg
ggcgggttcatcgagctgatcgagaacctgtcggcgaaggtcatggaaatgccgctgcac
ctgatgacccagacagttatcgagcagtccgggctcatcacgtatcacgaacaggaaaaa
ggcgagaaaggccaggcccgggtagaaaaccttgaggagctggtcagcgccgcacgcgcc
ttcgagaaccatgagagtgacgaagagctgacaccactggcggcgttcctcggccacgcc
tcactggaggctggcgacactcaggcgcaggagcatgaggaaagcatccagctgatgacc
ttgcacagcgccaagggcctggagttcccgcatgtgtttctggttgggatggaagaagga
ctgttcccgcacaagatgagcctggaagaaccgggccgcctggaagaggaacggcgtctg
gcttatgtcggcatcacccgcgccatgacgcaactggtgatgacctacgcggagacgcgt
cgtctgtatggcagcgaaacctataacaaggtctcgcgtttcgtgcgcgagatcccgcct
gcgctgattcaggaagtacggctgtccaacagcgtcagccgcccgttcggcggtacaccg
aaattcaacagcagcagcctgttcaacggcaccggcatcccggacaccgagttcaccatg
ggccagcgcgtgcagcatgcggtgtttggcgaaggcgtgatcctcaacttcgaaggcgct
ggcgcccaggcacgcgtgcaggtcaacttcgccgatggcagcaagtggctgatgatgggg
tatgcgaagctggtggcgttgtag
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