Psychromonas sp. GE-S-Ul-11: ACJ3XG_06845
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Entry
ACJ3XG_06845 CDS
T11561
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
psys Psychromonas sp. GE-S-Ul-11
Brite
KEGG Orthology (KO) [BR:
psys00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACJ3XG_06845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psys03021
]
ACJ3XG_06845
03400 DNA repair and recombination proteins [BR:
psys03400
]
ACJ3XG_06845
Enzymes [BR:
psys01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACJ3XG_06845
Transcription machinery [BR:
psys03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACJ3XG_06845
DNA repair and recombination proteins [BR:
psys03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACJ3XG_06845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XLW27678
LinkDB
All DBs
Position
complement(1509262..1510248)
Genome browser
AA seq
328 aa
AA seq
DB search
MQGSVIDFLKPRLVDIEQVSTTRAKVVLEPLERGFGHTLGNALRRILLSSMPGTAVTEVE
IDGVQHEYSTKEGVQEDILEILLNLKGLAVKLEGKNEVLVSLTKSGAGPVTAGDIIHDGD
VEIVNPEHVICNLTGNAEISMRIKIESGRGYVPASSRIHSEEDERPIGRLLVDATFSPVE
RIAYSVESARVEQRTDLDKLVIDMETDGTLEPEEAIRRAATILAEQLDAFVDLRTTYEAP
VAEAKPEFDPILLRPVDDLELTVRSANCLKAESIHYIGDLVQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLENWPPASLIED
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtaattgattttctaaaaccaagattagttgatatcgaacaagtttca
acaactagagcaaaagtggttcttgagccactagagcgtggctttggccatactttgggt
aatgctcttcgtcgtattttgttatcatctatgccgggaacggcggtaacagaagtcgaa
attgatggtgtacaacatgagtacagcacaaaagaaggcgttcaagaagacatcctagag
attcttcttaaccttaaaggtctagctgtaaagcttgaaggtaaaaatgaagttttagtt
agtttaactaaatctggcgctggtcctgttactgcaggcgacatcattcatgatggtgat
gtagagatagtcaacccagaacatgtgatctgtaatttaacaggcaatgctgaaatcagc
atgcgtattaaaattgaatcaggtcgcggttatgttccagcttcatctcgtattcatagc
gaagaagatgagcgtccaattggtcgtctattagtcgatgcgactttcagtcctgttgag
cgtattgcttacagtgttgaatcagctcgtgttgaacaacgtaccgatttagacaagctt
gttatcgatatggaaacagatggtactttagagccagaagaggcaattcgtcgcgcagct
acaattttagctgagcaattagacgcatttgttgatctgcgcactacttatgaagcacca
gtagctgaagctaaacctgagtttgatccaattcttttacgcccagtagatgatttagaa
ctaactgttcgttctgctaactgtttgaaagcagagtcgattcactatatcggtgatcta
gtacaacgtactgaagttgaacttctaaaaacgcctaacttaggtaagaagtctctaact
gaaatcaaagatgtgcttgcatcacgtggactgtctctaggcatgcgcttagaaaactgg
ccaccagcaagtctaatcgaagattag
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