KEGG   Promethearchaeum syntrophicum: DSAG12_00260
Entry
DSAG12_00260      CDS       T06555                                 
Name
(GenBank) transcription initiation factor IIB family protein
  KO
K03124  transcription initiation factor TFIIB
Organism
psyt  Promethearchaeum syntrophicum
Pathway
psyt03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:psyt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    DSAG12_00260
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psyt03021]
    DSAG12_00260
Transcription machinery [BR:psyt03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     DSAG12_00260
 Prokaryotic type
  Archaeal type
    TFB
     DSAG12_00260
SSDB
Motif
Pfam: TFIIB Zn_Ribbon_TF RB_B Zn_ribbon_RRN7 Sigma70_r4 Cyclin_C Rrn7_cyclin_C
Other DBs
NCBI-ProteinID: QEE14447
UniProt: A0A5B9D6N3
LinkDB
Position
complement(4035609..4036517)
AA seq 302 aa
MLMKSLPNTEKCCSDPDIIATDDGFIVCRNCGVVISQELVSSERRAYTADEVRSRRRTEP
RWRTYGPRTIIGLNKVDSKGHHLDSKKTQLFNRLSKIQGSLINSIERNFWESKPKLTNLC
LKLQIPSFIQESAWSIYTQVAKKKLTMGRSIESFVTASLYAAIRIHNFPRLLEELVDVAI
ISIRSVHRSLGLIVRLILPEMGLKYKPISPNPLIYRFGAELNLSIKTQRHAYDLLKTASH
KGLAKMGKDPKGIAAAVLYLASKNKGEKRTQTQIASIARITEVTLRTRAKQIRNKLQNIP
TE
NT seq 909 nt   +upstreamnt  +downstreamnt
atgttaatgaaatctttaccaaatactgaaaaatgctgcagcgatccagatattatcgcc
acagacgacggatttattgtgtgtcgtaactgtggtgtcgtaatttcacaagaacttgtg
tcaagtgagagaagagcttacactgcagatgaagttagaagtcgtcgtcgtacggaacct
cgttggagaacttatggtccgagaacaataatcggtttaaacaaggtagatagcaaaggc
catcatctggattccaaaaaaactcaactctttaacaggctatctaagattcaaggatcg
ttaatcaattcaattgaacgaaatttttgggaaagtaagcctaaactaactaatttatgt
ttgaaactgcagattcctagcttcattcaagagagtgcttggtcgatttatacccaagta
gctaagaagaaactcacaatggggcgaagtattgagtcctttgtcactgcatctctttat
gctgctattcgaatacataattttccccgattattagaagaattagtagatgtagccata
atctcaatccgttcggtgcatcggtctttaggattaattgtccgactcatactcccagaa
atgggattgaaatataagcctatatcccctaaccctttgatatatcgatttggtgcagaa
ttaaacctgtcaatcaaaactcaaagacatgcttatgacttattgaaaactgcttctcat
aaaggattggcaaaaatgggcaaagatcccaaaggaatcgctgccgcagtgctctattta
gcatcaaagaacaagggagaaaaacgaacccaaactcaaatcgcttctattgccagaata
accgaagtgactctcagaacacgcgcaaaacagatccgaaataaacttcaaaatattcct
actgagtaa

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