Promethearchaeum syntrophicum: DSAG12_00303
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Entry
DSAG12_00303 CDS
T06555
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psyt
Promethearchaeum syntrophicum
Pathway
psyt03420
Nucleotide excision repair
psyt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psyt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DSAG12_00303
03430 Mismatch repair
DSAG12_00303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psyt03400
]
DSAG12_00303
Enzymes [BR:
psyt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DSAG12_00303
DNA repair and recombination proteins [BR:
psyt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DSAG12_00303
MMR (mismatch excision repair)
Other MMR factors
DSAG12_00303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_12
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QEE14490
UniProt:
A0A5B9D6M4
LinkDB
All DBs
Position
complement(4096941..4098608)
Genome browser
AA seq
555 aa
AA seq
DB search
MDKMVLVSNALEIVKSNENISVLAGPGSGKTEILAQRVSFLLQTKSCPFPYRILAISFKR
DSATNLEYRALLRCGIELISRFDSLTIDAFTKGILDRFRLALPEDIRPIKNYKIQDKKKN
LLNNNKNILSFKRIQNLATWLIKNNKHLHNAIKQTYKYVLLDEFQDTTATQYNFIKESFM
GSSTILTAVGDIKQTIMIFAGAEKKIFDKFERDFGAKRIPLLINYRSKKKLQYIQSFFAE
KLDPNIKIRAEYQKNDEGDCKIFHFTNSEREAEIIALEIKKHIDKGISPEQICIIYRRKD
TRNKIDIYRGKIIQKLDILGIPARFENIYQEFLSEPIIKLVVSFIRLSLKEQSIEDWNNI
YNLLIYIKGFNEDTKLGRYQKLNLIIYNLSKALQKKFLRIETIQDLSKIYRPLINIFGFA
ELSTIYPQYLSRNYLKQVIDKFNFYFWQQYQIQKDWSKSLESLLGKDIIPIMTVHKCKGL
EFEVVIFIGLEDNAFFSYQRNRFSELCTFFVALSRAKSKIYFTNCDKREDSLQSINRIKE
IYDIFAQSGIKQISL
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggataaaatggtcttggtttctaatgctttagaaattgtgaaaagcaatgaaaatatt
agtgtattagctggtccaggatctggaaaaacagagatacttgctcaaagagtttctttc
ttattacaaactaaatcatgccctttcccatatcgtattttagcaatttcttttaaacgc
gattctgcaacaaatttagaatatagagctttactaagatgtggtatcgagttaatttct
agatttgattcattaacaatagatgcatttacaaaaggtattttggatagatttaggtta
gctttacccgaagatatcagaccaattaaaaattataaaattcaggacaaaaaaaaaaat
ttattgaataacaataaaaatattcttagttttaaacgtatccaaaatttagccacttgg
ttaataaaaaataataaacatctccataatgcaattaaacaaacttacaaatatgttcta
cttgatgaatttcaagatacaactgcaacgcaatataactttattaaggaatcttttatg
ggatcatccacaatattgactgctgttggggatattaaacaaacaattatgatatttgca
ggagcagaaaaaaaaatatttgataaatttgaacgagattttggggcaaaaagaattcca
ttattaatcaactaccgatctaagaaaaaactacaatatattcagagtttctttgctgaa
aagttagatccaaatataaaaattagagcagaatatcaaaaaaatgatgagggagattgt
aaaatttttcattttacaaattcagaaagggaagctgagataattgccttggaaataaaa
aagcatattgacaagggaatatctccagaacaaatatgcattatctatcgtcgaaaggat
actcgcaataaaattgatatttataggggaaaaatcatccagaaacttgatattcttgga
atacctgcacgttttgaaaatatttatcaggaatttttaagtgaaccaataataaaatta
gttgttagtttcattcgtttatctttgaaagagcaatccatagaagattggaataatatt
tacaacttacttatctatattaaaggtttcaacgaagatactaaattaggaagatatcaa
aaattaaatttgataatctataatttatcaaaagctttacaaaaaaaatttttaaggatt
gaaactatacaagatctctcaaaaatatatagacctttaatcaatatttttggatttgct
gagttatcaacaatatatccacaatatttaagtagaaattatcttaaacaagttatcgat
aaatttaacttttatttttggcaacaatatcaaatacagaaagattggagtaaatcatta
gaatctctcttgggaaaagatattattccaataatgactgttcataaatgtaagggtttg
gaatttgaagtagtaatatttattggcttagaagataatgctttttttagttatcaaaga
aatcgtttttctgaattgtgtaccttttttgttgctttatcaagagcaaaatcaaaaatt
tattttactaattgtgataagagagaagattcactacaatctattaatagaatcaaagaa
atttatgatatttttgcccagtctggtattaaacaaatttcactatga
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