Promethearchaeum syntrophicum: DSAG12_00377
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Entry
DSAG12_00377 CDS
T06555
Name
(GenBank) RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
psyt
Promethearchaeum syntrophicum
Brite
KEGG Orthology (KO) [BR:
psyt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psyt03016
]
DSAG12_00377
Enzymes [BR:
psyt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DSAG12_00377
Transfer RNA biogenesis [BR:
psyt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DSAG12_00377
Prokaryotic type
DSAG12_00377
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_C_2
TruB_N
PUA
DKCLD
Pus10_C
UPF0113
Motif
Other DBs
NCBI-ProteinID:
QEE14564
UniProt:
A0A5B9D642
LinkDB
All DBs
Position
4174108..4175130
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AA seq
340 aa
AA seq
DB search
MSFKIAYLLPYESTPHVYVVKSEETTDPQYGCKPQDRSLTMLIKTGIVNLDKPSGPTSHE
VASWVKKVLGLEKTGHGGTLDPGVTGVLPVALGPATKVIGALLSAGKEYICVMYLHGDVE
EKKIRNVLNLFTTNLYQRPPIKSSVARRLRTRRIYYTQFMEMKGRFVLFRVGCEAGTYIR
KLCFDIGEALLCGAHMSELRRSRTGEFREDSLCTLQDLNDAMKLYQEERNPEYLKNLIIP
MEKAVHHWKKIYIRDSAVDAIAHGASLAVAGVLYLEKTIEKDEQVAVMTQKGELVAFGVA
LMSSARMLKVFHGLCVSTKKVFMERGVYPHWKSTPKEIIP
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgagttttaaaatagcatatttactaccatatgaaagcactcctcatgtgtatgttgtt
aaatcagaagaaacaacagatccacagtatggatgcaaaccccaagatcgttcattaaca
atgctaattaaaacaggtattgtcaatttagataaaccttcaggtccaacaagtcatgag
gtggcttcttgggtaaaaaaagttcttggattggaaaaaacaggtcatggcggaacatta
gatccaggagttacaggagtattacccgtagccttaggtcctgccacaaaagttatagga
gctttattgagtgcggggaaggaatatatttgtgttatgtatctccatggggatgtagaa
gaaaaaaaaatccgtaatgttttgaacctttttacaactaatttatatcaacgtcctcca
attaaatcttcagtggcgcgaagacttagaactcgcagaatatactatacccaatttatg
gaaatgaagggaagatttgttctttttcgtgttggatgtgaagctggtacttacattcga
aaattgtgttttgatattggggaagctctgttatgcggagctcacatgtctgaattacgg
cgatcaagaacgggtgaatttcgtgaggattccctttgcaccttacaagatttaaacgat
gcaatgaaattatatcaggaagagagaaatcccgaatatctaaagaatttaataattcca
atggaaaaagcagtacatcattggaaaaaaatatatattcgcgattctgctgttgatgcc
atagctcatggtgcaagtttagcagtagcgggagtcttatatttagaaaaaactattgaa
aaggatgaacaagtagcagttatgacgcaaaaaggagaattggttgcttttggcgtcgca
ttgatgagttccgcaaggatgctcaaagtgtttcatggattatgtgtaagtacaaagaaa
gtttttatggaacgaggcgtatatccacactggaagtcaacacctaaagaaatcatacca
taa
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