Promethearchaeum syntrophicum: DSAG12_00381
Help
Entry
DSAG12_00381 CDS
T06555
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K13798
DNA-directed RNA polymerase subunit B [EC:
2.7.7.6
]
Organism
psyt
Promethearchaeum syntrophicum
Pathway
psyt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
psyt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DSAG12_00381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psyt03021
]
DSAG12_00381
Enzymes [BR:
psyt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DSAG12_00381
Transcription machinery [BR:
psyt03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
DSAG12_00381
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
DUF8122
Zn_ribbon_NOB1
Motif
Other DBs
NCBI-ProteinID:
QEE14568
UniProt:
A0A5B9D606
LinkDB
All DBs
Position
4177588..4180974
Genome browser
AA seq
1128 aa
AA seq
DB search
MTIAANKINSGIKSEDMWVLLSAYFKEIGLVRQHLDSFDVFLEDTLQQICDETKKIIPDI
PDFYIIFGKITVESPAVREADGATKTITPLEARIRELTYASKIFLEMTPVTVDERTQRAN
YNETIKTYIGKLPIMLKSSKCSLQTLSPEELINIGEDPLDPGGYFIINGTERALVTQEDL
APNRILIEEASRSSSATHIAKVFSTTHGFRAPVTIERRKDGNIRVALPSVPGKIPIAILM
RALGLASDKRIFEAISDNPEIQKELIPIIDVASAIDISSDQQKSMMNALDYVGKRVAVGQ
TREYRIKRAQQVLDRYLLPHIGYEKEDRIKKAYFLGQMTQKVLELALEIRRPDDKDHYSN
KRLKLAGDLFTSLFRVSFLNLTRDIKYQLERTAVRGRKPNIKTAVRADVITERIRHALAT
GNWVGGKAGVSQLLDRTNFISTLSHLRRIISPLSRSQPHFEARDLHPTQWGKICPAETPE
GPNCGLVKNLALTALISVGTNEKRIETALYDLGVIPLEEVEEVSGKAKIFLNGKLLGVHP
NYIPLLETIRMKRRRGDLNANVNLAFYHDSNEIQINCDAGRARRPLLVVQNGKILLTIED
VDKIRKGLSTWNDLIARGIIEYFDAEEEENALIAINERDITLEHTHLEIAPAAILGITAS
LIPFPDHNQSPRNTYEAGMAKQALGIFAANFHLRLDTRGHLLHYPQKPLVSTRAMEIVGF
DTRPAGQNFVLGIMSFQGFNIEDALIMNKASVERGLSRSTFFRTYEGEERKYPGGQLDKF
EIPEKEVRGYRASEAYRHLAYDGVIEPETECLGGDVLIGRTSPPRFTHPYDDFDDMSQPQ
RRETSINMRHSEKGIVDTVILTETLDGNKLIKIKVRDLRIPELGDKFASRHGQKGVLGLI
CPQEDMPFSAEGIVPDLVINPHAIPSRMTLGQMFEGCAGKIAAAVGHVANGTPFEMEDMD
ELQLQLVENGFDYGGRETLYNGVTGKKYDVAIYFACVYYQKLHHLVADKIHARARGPVQI
LTRQPTEGRAREGGLRFGEMERDCLVGHGSAVLLKERLLDESDRTQILICEKCGLLGIYD
RNRDRTYCPICGEKSLISSVTCSYAFKLLLQEMMSLGLAPRLILKDRA
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgacaatcgctgcaaataaaattaatagtggaattaaatcagaagatatgtgggttctt
ttaagcgcatatttcaaagaaatagggttagttcgtcagcatttggactcatttgacgtg
tttctagaagacacacttcaacagatctgcgatgaaactaaaaaaatcatccctgatatc
cccgatttttatattatttttggaaaaatcacagtagaaagcccagcagtacgtgaagca
gatggggctactaaaactatcacacctcttgaagctcgtatacgagaacttacttatgct
agtaaaatatttctggaaatgactcctgtaacggttgatgaacgtactcaacgagctaat
tataacgaaaccatcaaaacatacattggaaaactcccaattatgttgaaatcatccaaa
tgctcattacaaacgctttcacctgaagaactgattaatatcggtgaagatcctcttgat
cctggtggttatttcataatcaatggaaccgaacgtgctttagttacgcaagaagattta
gctcccaataggatcttaattgaagaagcaagccgaagttcatcagcaactcatatagca
aaagtattttccacaacccatggatttagagcaccagttactattgaaagacgaaaagat
ggaaacattcgtgttgcattaccttcagttcctggaaaaatcccaattgcgatcttaatg
cgcgcattgggtttagcttcagataaacgtatttttgaagcaattagtgataatccagaa
attcagaaagaattaattccaattatagatgtcgcttctgcgatagatatttcatccgat
caacaaaaatccatgatgaatgcattggattatgttggaaaacgtgttgcggttggacaa
acaagagaatatcgtatcaaaagagcacaacaagtgttagatcgatatttattacctcat
attggatatgaaaaagaagaccgaattaaaaaagcatatttcctcggtcaaatgacacaa
aaagtattagaattagcacttgaaattcgaagacctgatgataaagaccattactcgaat
aaacgattaaaactcgccggagatttgttcacttctcttttccgagtatctttcctcaat
ttaacccgagatattaagtaccaattagaaagaactgctgtaaggggtcgaaaacctaat
attaaaaccgccgttcgagcagatgttattactgaacgaatcagacatgcattagccaca
ggaaattgggttggtggaaaagcaggcgtatcacaattattagatcgaaccaatttcatc
tcaactttaagccatttacggcgaattatttctccacttagcagaagtcaacctcatttt
gaagctcgagatttacatcctactcaatggggaaaaatatgccctgcagagactccagaa
gggcctaattgtggtttagtaaaaaatcttgctctaactgctttgatatcagttggaacc
aacgaaaaacgaattgaaactgcattatatgatttaggcgtaattccattagaagaagta
gaagaagttagcggtaaagccaaaatatttctgaatggaaaattactcggagttcatccg
aattacattcccctattagaaacaatcagaatgaaaagacgcagaggagatctcaatgca
aacgtaaatttagccttttatcacgattcaaacgaaattcaaattaactgtgatgcagga
cgcgccagaagacctctattagtagtccaaaatggtaaaatcttattaactattgaagac
gttgataaaatccgaaagggattaagtacctggaacgaccttattgcgcgcggtatcatt
gaatatttcgatgcagaagaagaagaaaatgcacttattgcaataaacgaaagagatatc
acactagaacatactcatcttgaaattgcacctgctgcaattttaggaattacagcatct
cttattcctttcccagatcacaatcaaagtcctcgaaatacttatgaagcaggaatggcc
aagcaagcccttgggatttttgctgcaaactttcatttacgacttgatactcgcggtcat
ctattacattatccgcaaaaaccactggtaagcactcgagctatggagattgttggtttt
gatactcgcccagcaggacaaaatttcgttttaggaattatgtcttttcaaggatttaac
attgaagatgccctcattatgaataaagcttcagtagagcgtggactttcacgaagcacc
ttcttccgaacttatgaaggtgaagaaaggaaatatccgggcggacaactcgataaattc
gaaattcccgaaaaagaagtacgaggatatcgtgcctcagaagcttatcgtcatttagct
tacgacggagttatcgaaccagaaaccgaatgcttaggaggggatgtattaattggaaga
accagcccacctagattcacacacccttacgatgatttcgatgatatgagtcaacctcag
cgaagagaaacatctatcaatatgcgacatagtgaaaaaggaatagtagatactgtaata
cttactgaaactttagatggaaataaattaattaaaataaaagttcgcgatttacgaatt
ccagaattaggtgataaatttgcatcacgccacggacaaaaaggagtacttggattaatc
tgtcctcaagaagatatgccattttcagcagaaggtattgttccagatttagttatcaac
cctcatgctattccttcccgtatgactttagggcagatgtttgaaggttgtgcaggaaaa
attgcagctgcagttggtcatgtagctaacggaacaccttttgaaatggaagatatggat
gaattgcaactacaattagtcgaaaatggatttgattatggcggtcgggaaactctttat
aacggagtcaccggcaaaaaatatgacgttgcaatctattttgcttgtgtctattatcaa
aaattacaccatcttgttgcagataagattcatgctcgtgcacgcggtccagttcagatt
ttaacacgtcaaccaaccgaaggtcgagcccgtgaaggaggattaaggttcggagaaatg
gaacgggattgtctagtcggccatggttcggcagttttactcaaagaaagattattagat
gaatcagatcgaacccaaatattaatctgtgagaaatgtggacttttgggtatatatgat
agaaatagagatagaacttactgcccaatttgtggagaaaaatcattaatctcttccgtt
acatgttcttatgcttttaaattactattacaagaaatgatgtcattaggattagcaccg
agattgattttgaaagatcgggcttaa
DBGET
integrated database retrieval system
