Promethearchaeum syntrophicum: DSAG12_00506
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Entry
DSAG12_00506 CDS
T06555
Name
(GenBank) transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
psyt
Promethearchaeum syntrophicum
Pathway
psyt03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
psyt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DSAG12_00506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psyt03021
]
DSAG12_00506
Transcription machinery [BR:
psyt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
DSAG12_00506
Prokaryotic type
Archaeal type
TFB
DSAG12_00506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
RB_B
Zn_ribbon_3
Motif
Other DBs
NCBI-ProteinID:
QEE14693
UniProt:
A0A5B9D6U1
LinkDB
All DBs
Position
complement(4309359..4310258)
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AA seq
299 aa
AA seq
DB search
MAIPNFYEKENEDEPCCSDPAIHNDDGMRVCHNCGMVLGRSFVATEKRAYTADEVKNRKR
TEPRWRNFGPRTIIGTNSPDAKGVSLQGKKQAMFNRLSKIQGSLVNSLERNFWEARPKIN
QLAQKLNIPDHILETAWKIYSEVAKQKLTMGRSIDSFVTASLYAGIRIHNFPRLLEEVVD
IALLPLRSVHRSLGLVVRNVLPVLNLRYKPISPGPLVFRFGNDLNLSVLVQQKAANMLKT
ALKHGLKKMGKDPKGLAAAALYIAAKSTAERKTQTEISEIARVTEVTLRTRAKQIKLNI
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggcaataccaaatttttacgaaaaggagaatgaagatgaaccatgttgcagtgatcct
gctatccataacgatgatgggatgagagtgtgccataattgtgggatggttttaggaaga
tcgttcgtagcaacagaaaaacgcgcttatacagccgacgaagttaaaaatcgtaaaaga
actgagccacgatggagaaactttggtcccagaacaataattggtacaaattcacctgat
gcaaagggtgtatcccttcaaggcaaaaaacaagcaatgtttaaccgtctttccaaaatc
caaggttctttagttaattcactcgagcgtaatttttgggaagctcgcccaaagatcaac
caacttgcccagaaattaaatattccggatcatattcttgaaaccgcctggaaaatctat
tcagaggttgctaaacaaaaattaaccatgggaagaagcattgattcatttgtgacagca
tctctttatgccggaatcagaattcataatttcccgcgcttattagaagaggtagtagac
atagcattgcttccattacgaagtgttcatcgttccttaggtttagtagtccgaaatgtt
ttaccagtgcttaatcttcgctacaaaccaatttcaccaggaccacttgtgttccggttt
ggaaacgatttgaatttatccgttctagttcaacaaaaagcagcaaatatgttgaaaact
gcattaaaacatggattaaaaaaaatgggtaaagatcctaaaggattggctgcagcggct
ctttatatcgcagctaaatcaacagcagaacgaaaaactcaaacagaaattagtgaaatt
gccagagttaccgaagtaactttgcgaacacgagcaaaacaaattaaattaaatatctaa
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