Promethearchaeum syntrophicum: DSAG12_00586
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Entry
DSAG12_00586 CDS
T06555
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
psyt
Promethearchaeum syntrophicum
Pathway
psyt03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
psyt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DSAG12_00586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psyt03021
]
DSAG12_00586
Transcription machinery [BR:
psyt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
DSAG12_00586
Prokaryotic type
Archaeal type
TFB
DSAG12_00586
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Zn_ribbon_tTFIIB
RB_B
Sigma70_r4_2
HTH_AsnC-type
HTH_24
GerE
Zn_ribbon_LysW
MLD
A2L_zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
QEE14770
UniProt:
A0A5B9D7F6
LinkDB
All DBs
Position
68389..69363
Genome browser
AA seq
324 aa
AA seq
DB search
MVQNHLSMEASNKKNCFCESLHNCPECRSESIFKDSLRGEYICTNCGLILESNTIDHRAE
WRTFDSRDYEKKSRVGAPFTLTIHDKGLSTIIDWRDRDGLGKKLSPVKRAQAYRLRKWQI
RMRIHSAIDRNLSFAMSELDRLASQLGIQKTLKETSALIYRKTINKNLIRGRSIEAMMAA
SIYAACRLAQIPRTLDEFAKNSRIEKKELGKSYRLILRQLNLKITSINPNRFVSRFANDL
EISQQSQLKAIKILNGARRIGITSGKDPCGLAAASIYVAVLSNGERKTQKEIARVANITE
VTVRNRYKELIGKLNLKIEPLITN
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggttcaaaatcatttatcaatggaagcttccaataaaaaaaactgtttttgtgaatca
ttacataattgcccagaatgtagatctgaatcaatttttaaagattccttaagaggagaa
tatatttgtacaaattgtggattaattttagaatcaaatacaattgatcaccgagcagaa
tggagaacatttgattcacgcgattacgaaaaaaaatcacgtgttggagctccttttact
ttgacaatacatgataaagggctttccacaattattgattggagagatagagatggttta
ggaaaaaagttatctcctgttaagcgagctcaagcttatcgtttacggaaatggcaaatt
cgaatgcgaattcactcagctatagatagaaacttatctttcgctatgagtgagttagat
agattagcttcacaattaggaattcaaaaaacgctgaaagaaacatctgcattaatttac
agaaaaacaataaataaaaatttgatacgtgggcgatctatagaagcaatgatggctgca
tcaatttatgctgcatgcagattagctcaaattcctaggactttggatgaatttgcaaaa
aattctcgaattgaaaaaaaagaattagggaaatcatacagattaattctgcgccaacta
aatttaaaaattacctcgataaatccaaaccgttttgtctcacgatttgctaacgatcta
gagatatcacaacaatctcaacttaaagctattaaaatattaaatggtgctcgaagaatt
gggataactagtggtaaagatccatgtggattggctgctgcatcaatttatgttgcagtt
ttaagcaatggagaacgaaaaacacaaaaagaaattgctcgagttgctaatataactgag
gttacggttagaaatagatataaagaattaataggtaaattgaatttaaaaattgaaccc
ttaattactaattaa
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