Promethearchaeum syntrophicum: DSAG12_00598
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Entry
DSAG12_00598 CDS
T06555
Symbol
prf1
Name
(GenBank) peptide chain release factor aRF-1
KO
K03265
peptide chain release factor subunit 1
Organism
psyt
Promethearchaeum syntrophicum
Pathway
psyt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
psyt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
DSAG12_00598 (prf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psyt03019
]
DSAG12_00598 (prf1)
03012 Translation factors [BR:
psyt03012
]
DSAG12_00598 (prf1)
Messenger RNA biogenesis [BR:
psyt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
DSAG12_00598 (prf1)
Translation factors [BR:
psyt03012
]
Eukaryotic type
Release factors
DSAG12_00598 (prf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
DNA_ligase_ZBD
HypA
Motif
Other DBs
NCBI-ProteinID:
QEE14782
UniProt:
A0A5B9D6V3
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All DBs
Position
complement(77838..79112)
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AA seq
424 aa
AA seq
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MSESKKKEKEESSYKRYLLKKYLDILKNKRGFHTALISLTIPPTKKISDVTSYLKKEIGE
SSNIKSKGNRKNVIDSITAILGKLKNIKEFPPNGLIIYSGQVPEDNKPGTESSEIYIIEP
PEPLKTFQYYCAAEFLLDPLYDMVQEKGAYGIINIENKEAAIGWIRGTHLEISKTFTSGV
HSKHHAGGQSQRRLERLIEEGAQNFYKRVGETANSIFMEFDDLKGIFVSGAGMTKAKFVK
KGVLDYRLKDKVLDLIDVSYSGEAGIRETVIKIQDKIQSLRYIQEKQVFNIFMENISKDT
NLATYGEKQVRKALEMGAVDILLLSEGVQLIRVHVKCGKCNTEYYETIPTEKIREFYEHV
NTLSCPSCQSNLIQIEGELDLVEELGDLAEIQGTKIELLSTETEEGTMLISTFGGIAAIL
RFKI
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaatctaagaaaaaagaaaaagaagaatcatcttataaacgttatttactaaaa
aaatacctggatatattaaaaaataagagagggtttcatacagctctcatttccttaact
attcctcccactaaaaaaatctctgatgttacttcctatttaaaaaaagaaatcggagaa
agctcaaatattaaatctaaaggtaataggaagaatgttattgatagcattaccgctata
cttggaaaattaaaaaatattaaagaattccccccaaatgggttaattatatattcggga
caggttccggaagacaataaaccgggaactgaaagtagtgaaatatatattattgaacca
cctgaaccactaaaaactttccaatattattgcgctgctgaatttttacttgatccatta
tatgatatggttcaagaaaaaggagcatatgggataatcaacattgaaaacaaagaagca
gcaataggatggataagaggaacccatttagaaatttctaaaactttcacatcgggtgtt
catagtaaacatcatgctggggggcaatctcagagaagattggaacgtcttatcgaggaa
ggggctcaaaatttctataaacgtgttggagaaacagctaactctatttttatggaattt
gacgatcttaaggggatttttgttagcggagcaggtatgacaaaagctaagtttgtaaag
aaaggagtgttagattatcgattaaaagataaagttctcgatttaattgacgttagttac
tctggtgaagcaggaatcagagaaactgtaataaaaatacaagataaaatccaatcttta
cgctatattcaagaaaaacaagtatttaatatttttatggaaaatatctcaaaggatacc
aatttagcaacctatggagagaaacaagttcgaaaagctttggaaatgggagcagttgat
atattgctcttatctgaaggggttcaacttattcgtgttcatgtaaaatgtggaaaatgt
aatactgagtattatgaaacgattccaaccgaaaaaattagggaattctatgaacacgta
aatacactctcatgtccctcttgtcaatctaaccttattcaaatagaaggagaattggat
ttggttgaagaattgggtgatttagcagaaattcaagggacgaaaattgaattattatca
accgaaactgaggaaggaacaatgcttatttcgacttttggcgggattgccgcaatactc
aggtttaaaatatag
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