Promethearchaeum syntrophicum: DSAG12_00658
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Entry
DSAG12_00658 CDS
T06555
Name
(GenBank) DUF2240 family protein
KO
K07466
replication factor A1
Organism
psyt
Promethearchaeum syntrophicum
Pathway
psyt03030
DNA replication
psyt03420
Nucleotide excision repair
psyt03430
Mismatch repair
psyt03440
Homologous recombination
psyt03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
psyt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DSAG12_00658
03420 Nucleotide excision repair
DSAG12_00658
03430 Mismatch repair
DSAG12_00658
03440 Homologous recombination
DSAG12_00658
03460 Fanconi anemia pathway
DSAG12_00658
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psyt03000
]
DSAG12_00658
03032 DNA replication proteins [BR:
psyt03032
]
DSAG12_00658
03400 DNA repair and recombination proteins [BR:
psyt03400
]
DSAG12_00658
Transcription factors [BR:
psyt03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
DSAG12_00658
DNA replication proteins [BR:
psyt03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
DSAG12_00658
DNA repair and recombination proteins [BR:
psyt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
DSAG12_00658
MMR (mismatch excision repair)
DSAG12_00658
DSBR (double strand breaks repair)
HR (homologous recombination)
DSAG12_00658
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
Rep_fac-A_C
CDC24_OB3
DUF3127
OB_MEIOB_N
DUF2240
Ssb-like_OB
Motif
Other DBs
NCBI-ProteinID:
QEE14841
UniProt:
A0A5B9D782
LinkDB
All DBs
Position
137970..139682
Genome browser
AA seq
570 aa
AA seq
DB search
MGIENTIQKIMEEKKLSREEIKNLIDKQIEDFSGLIDEEGAIVIVAKELGIDVKAHQESA
KMESDQLITNLKPRMNASIVGRIVEISEVKTFNKKDGSKGSLLPFILEDTSGMIRCLAWD
DFNTQIITDNNFRLNEIVRIVNGFVKQSQVGSLEIHIGSKSRIQTQPDEVDRTLIPAINH
SETKITPINQLSLKKLTLSIEGVITTLYPTKKFTRKNGTEGKRASLQISDSTGLTYLTFW
GDHCEMIKDIKEDQKVRITKLSPKSNYRDKTKIDLTATSNTKITIIEEETHLENSIKSIE
NLLEIGGFGNIEGIIQEIGDQKSIQLKNGESTKLQKMVLADETGEIIVTIWGDKINPDLK
VDDSILIKKALVKINSYSNEMEASLSTRGSIERSEKTFNIGERSKTLERTPPNSTTERKK
IEDINQDDFYEFKGSIIQEIKRIFFYIACSKCNRKIDNCKCDQQGDHVNRMILNLILDDE
SSTIRGTMMTKNAELLLNESTDNIKKMEENGELEEFLKNKSLELIGKEFIFSGKAKFSEY
NDNYEINIARFKELDSELEAQNIIDILDDI
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgggaatagagaacaccattcaaaaaattatggaagaaaaaaagttatctcgtgaggaa
attaaaaatcttatagataaacaaatagaagatttcagtggattgatagatgaggaagga
gccattgttattgtagcaaaagaactaggtattgatgttaaagcgcaccaagaatcagcc
aaaatggaatcggatcaactaataacaaacctaaaacctagaatgaacgcctcaattgtt
ggtagaatcgttgaaattagtgaagttaaaacatttaataaaaaagacggaagtaaaggg
tcattattaccatttatattggaagatactagtgggatgatccgatgcttagcatgggat
gatttcaacactcaaataattacagataataattttagattaaatgaaatcgttagaata
gtaaatggttttgtaaaacagagccaagttggaagtcttgaaatacatattggctcaaaa
agcaggatacaaacgcaaccagatgaagtagatagaacacttatccctgctataaatcat
agtgaaaccaaaatcactcccataaatcaattatctttaaaaaaactaactctttcaatt
gaaggagtaattactacattatatccgactaaaaaattcactcgaaaaaatggaacagaa
ggtaaacgtgcttctcttcaaatatcagattctactggattaacatatctgacattttgg
ggagatcattgtgaaatgattaaagatattaaagaagatcaaaaagtgagaattaccaaa
ctttcccctaaatctaattatagagataaaactaaaatagatttaacagccacttcaaat
actaaaattactattattgaagaagaaactcatcttgaaaattccattaaaagcatagaa
aatcttcttgaaataggtggatttggaaacattgagggaataatccaagagattggagat
caaaaatcaattcaattaaagaatggagaatcaacaaaacttcaaaaaatggtattagct
gatgaaactggagaaattattgtaacaatttggggggataaaatcaatccagatttaaaa
gtagatgattcaatcctaataaaaaaggccctagttaaaataaatagttactccaatgag
atggaagcatcactatctacaaggggttctattgaaagatcagaaaaaacatttaatata
ggtgaaagatcaaaaacattagagagaactccaccaaatagcacaactgaaagaaaaaaa
atagaagacattaatcaagatgatttttatgaatttaaaggttcaataattcaggaaatt
aaaagaattttcttttatattgcttgttcaaaatgtaatcgaaaaattgataattgcaaa
tgtgatcaacaaggagatcatgttaatagaatgattctaaatttaattttagatgatgaa
agcagcacaattagaggtacaatgatgactaaaaatgcagaattgcttttgaatgaatca
actgataatattaaaaaaatggaagaaaatggggaattggaagagtttctaaagaataaa
agccttgaattgattggaaaagaatttatttttagtggaaaagcaaaattctcagaatat
aatgataattatgaaataaatattgctagatttaaagaacttgattctgaactggaagcc
caaaatatcattgatattcttgacgatatttga
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