Promethearchaeum syntrophicum: DSAG12_00680
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Entry
DSAG12_00680 CDS
T06555
Name
(GenBank) transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
psyt
Promethearchaeum syntrophicum
Pathway
psyt03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
psyt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DSAG12_00680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psyt03021
]
DSAG12_00680
Transcription machinery [BR:
psyt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
DSAG12_00680
Prokaryotic type
Archaeal type
TFB
DSAG12_00680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_Ribbon_TF
TFIIB
DZR
DZR_2
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
QEE14860
UniProt:
A0A5B9D7Z2
LinkDB
All DBs
Position
159231..160259
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AA seq
342 aa
AA seq
DB search
MFQSQYIINQNDSNICPECESKLIQNGHENVCENCGLVIDSVLFVDSFQFNDTINSDLST
GDQFVSVGKTIDNICTLGSHIDFFSTKVFCDYKRKTISSNLQKKFRKLKSYTFPIKIKNH
ETDYRVLRILNSIIKYLGLSSIVKNRAAYYYQSIKRRSPSIRNHISLIGFCIFYASREFC
SNAPVSIREICNIFNIKGHRVSPRLIIRDSIDYQKYLNKKNHPHRSEDYISRFINSIVSS
PEVVNRMKKKQSIWTRAIYKNLLTNKCNFIIESINKGRKRSWNPFILAGATVYCADKLLA
KEYDTKSILTQKIASNAMNIAEYSIRDHYVKILKPLFDSINL
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
ttgttccaatcccaatatattattaatcagaacgattcaaacatttgtccagaatgtgag
tcaaaattgattcaaaatggacatgaaaatgtttgtgaaaattgtggtctagtaattgat
tctgttttatttgttgatagctttcaattcaatgatactattaattcagatttatctaca
ggagatcaatttgtatctgttggaaaaactatcgataatatctgtactttaggaagtcat
atcgattttttctcaacaaaagtattttgtgattataaacgaaaaactatttcttcaaat
cttcaaaagaaattcagaaaattaaaatcgtacacttttcctataaaaataaaaaaccat
gaaacagattatagagttttaaggatattaaatagtattattaaatatttagggttgtct
tcaatagtaaagaatcgcgctgcctattattatcaatcaataaaacgtcgatctccatcg
attcgaaatcatatttcgttaattggtttttgtattttttacgcttcgagagagttttgc
tcaaatgctccagttagtattcgtgaaatttgtaatatatttaacataaaaggtcatagg
gttagtcccagattaattataagagatagtattgattatcaaaaatacctaaataaaaaa
aatcatccacatagaagtgaagattatatctcaagatttatcaattcaattgtaagctca
cctgaagttgtaaatagaatgaagaaaaaacaatctatttggacaagagcaatttataaa
aaccttttaacaaataaatgtaattttataattgaaagcattaataaagggagaaagcgg
tcatggaacccttttattcttgctggtgcaacagtttattgtgcagataaattgcttgca
aaagaatatgatacaaaatcaatattaactcaaaaaattgcttcaaatgcaatgaatatt
gcagaatattcaatccgagaccattatgttaaaattctaaaaccactatttgattctata
aacctataa
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