Promethearchaeum syntrophicum: DSAG12_00991
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Entry
DSAG12_00991 CDS
T06555
Name
(GenBank) DHHA1 domain-containing protein
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
psyt
Promethearchaeum syntrophicum
Pathway
psyt03410
Base excision repair
psyt03430
Mismatch repair
psyt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psyt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DSAG12_00991
03430 Mismatch repair
DSAG12_00991
03440 Homologous recombination
DSAG12_00991
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psyt03400
]
DSAG12_00991
DNA repair and recombination proteins [BR:
psyt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
DSAG12_00991
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DSAG12_00991
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DSAG12_00991
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
DHH_CID
Shikimate_dh_N
STIV_B116-like
Ribosomal_S13
Orbi_NS3
Motif
Other DBs
NCBI-ProteinID:
QEE15167
UniProt:
A0A5B9D8F7
LinkDB
All DBs
Position
complement(494642..496045)
Genome browser
AA seq
467 aa
AA seq
DB search
MLYHLYKMINQKFENYLETTALEFLENKAKYKEIISIHHTDADGISSGAIIKKMLERLGL
KFKQYAFNLDVSWKNYIFNLGKSFKSPCAIIFSDLEPSGAIICDLLEKYPNFDIYIIDHH
LFKKDPLREFPENVYNCNPTLFGLNGLKEIVGVTLNYLFAREIDERNKDLAWLAAIGMGG
DTLDHINNYKSYNKLVIEEALELGQIELHKGICAFGGQFERLDKALSMSILPYIPSLEGD
RDKARILLQKLNIDPKLKITDLNSAQINNVVNELNLPELKGEYITFPKKKGILHHVFEYA
ALISIVGHDNPSEAFKLLTLNNVPKNLKIKYYKHNNAIVSNLTTFLKLKKIVTKSAIFVD
LTNKIDVSRWSNIGSFATINKIYDEEKALFIGGMAKEGNMKFSVRCSQLFIKNHNGKGTN
AIIKEITNRFGGSGGGHGLAGGMRIDPENYPLLTNEIDDIINSINNN
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
gtgttatatcatttgtataagatgattaaccagaaatttgaaaattatttagaaacgaca
gcattagaatttttagaaaataaagcaaaatataaagaaatcatatctattcaccacaca
gatgcagacggaattagctcaggtgctataattaaaaaaatgctcgagagactaggtctt
aaatttaaacaatatgcatttaatcttgatgtttcttggaaaaattatatatttaactta
ggaaaatcatttaaaagcccttgcgcgataatattttcagatttggaaccatcaggagca
attatttgcgatttattagaaaaatatcctaattttgatatatacattatagatcaccac
ttattcaagaaagatccactgagagaatttcctgaaaatgtatataattgtaatcctacc
ctctttggattaaatggtctaaaagaaattgtgggagttacattaaattatttatttgcc
agggaaattgatgaacgaaataaagatttagcttggttagcagctattggaatgggtgga
gacacattagatcatatcaacaactacaaatcttataataaacttgtgattgaagaagct
ctcgaattaggacaaattgaacttcataaaggaatttgcgcgtttggaggacaatttgaa
agattagataaagctttatctatgtcaattttaccatacattcccagtttagagggagat
cgagataaagcgaggattcttcttcaaaaattaaatattgatcccaaattaaaaattacg
gatttaaattctgcccaaatcaataatgtagttaatgaactaaatcttccagaacttaag
ggcgaatatataacatttcccaaaaaaaaggggatactccatcatgtttttgaatatgcc
gctctaatctccattgttggtcatgataacccttctgaagcatttaaattgttaactcta
aataatgtaccaaaaaatctcaaaattaaatattataaacataataatgcaattgtttca
aatttaacgacatttcttaaattgaagaaaattgtaacaaaatcggcaatatttgttgat
ctaacaaataaaattgatgttagtagatggtctaatattggtagttttgctacaatcaat
aagatttatgatgaagaaaaagctctttttatcggaggtatggcgaaagaaggaaatatg
aaattttcagtaagatgttctcaattatttattaagaatcacaatggaaaaggaacaaat
gcaatcattaaagaaatcactaatcggtttggaggatctggaggaggacatgggttagcc
ggagggatgagaattgatcctgaaaattaccctttactcacgaacgaaattgatgatata
attaattcaattaataataattag
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