| Entry |
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| Name |
(GenBank) helicase C-terminal domain-containing protein
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| KO |
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| Organism |
psyt Promethearchaeum syntrophicum
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:psyt00001]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DSAG12_02088
09124 Replication and repair
03420 Nucleotide excision repair
DSAG12_02088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:psyt03021]
DSAG12_02088
03036 Chromosome and associated proteins [BR:psyt03036]
DSAG12_02088
03400 DNA repair and recombination proteins [BR:psyt03400]
DSAG12_02088
Enzymes [BR:psyt01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
DSAG12_02088
Transcription machinery [BR:psyt03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
DSAG12_02088
Chromosome and associated proteins [BR:psyt03036]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
DSAG12_02088
DNA repair and recombination proteins [BR:psyt03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
DSAG12_02088
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
1682082..1684067
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| AA seq |
661 aa
MVILGYNDYFPYSSYRPSQEKVIQEISEAVALGKNSILIATNGTGKTVMALSAALPIVMQ
DPKRKILFCSRTFTQNARVIEESKEIVHKNGDGDKIQSFGALSLRGRNEMCIHKTITRLK
LPPRESMSVCATLRKNKRCKFFLNLFKKKRNKEFEDYLEILAESPLESQDLMDLAEKDDL
CPYFLSKTLLAKEKIVVCNYQWIFEPNIRKNFMEAMGTTLSDCVVIMDECHNLPEIATGI
NSFRLTPFTLSQALKDLEIFRATLNLIHFIENLAEILKNIKKNQNFNEVKLKKHRFLQEI
LKKNNYNSLTELKKILIDLNEYGEAIQAEKIERNMILRDHIFPIVDFFNQYIDHIDDEAY
FPCLTMKDTSKGKSIALEVKCFAPRLITDPIFKESFATLSLSGTLHPFTYTQLLGLNESG
KKLKIIKMKPPFPKKNAKVLLTRDLNTRGNNRTAETYRSILIALKPILMNTPKNVGVFCA
SYEVLNGLLDNDFERLAKMCNKKVYHEEMGLSAKDNDVIIENFKEQSTKESGNGAVLLGV
CGGRNSEGEDFPGDNMNAVVVVGIPFQRPTPSGNAKNNYYEKLFPGKGRLFGYTIPALQR
SNQACGRPIRKMDDRGLIVLMDNRFWQHRAYLSDWIQQSIIKIPNNTTIIKREVQSFFLH
E |
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| NT seq |
1986 nt +upstreamnt +downstreamnt
atggttatcttaggatataatgattatttcccgtattcctcatatcgcccttctcaagaa
aaggtaattcaggagatttcagaggcggtggcacttgggaaaaattcaatattaattgct
acaaacggaacaggaaaaaccgtcatggctctttctgcagctcttcccattgttatgcaa
gatccaaagaggaaaattttgttttgttcaagaacttttactcaaaatgctcgtgtaatt
gaagaatcaaaagaaattgtacataaaaatggtgatggtgataaaattcaatcttttggc
gctttaagtctacgtgggcgtaatgagatgtgcatccataaaacaataactagattgaaa
ttaccccctagagaatctatgagtgtttgtgcaactttacgaaaaaataagaggtgcaaa
ttctttcttaatctttttaaaaagaaaagaaataaggaatttgaagattatctagaaatt
ctcgcagaaagtccattggaatcccaagatttaatggatctggctgagaaagatgatctt
tgtccatatttcttaagtaaaacattgctagcaaaagaaaaaatcgttgtctgtaattat
caatggatatttgaacccaatattagaaaaaactttatggaagcaatgggtactacttta
tcagattgtgtagttattatggacgaatgccataatcttcctgagatcgctactggaatt
aattcatttcggttaaccccttttactttatcacaagcgttaaaagatttagaaatattt
agagcaactcttaatttaattcattttattgagaatcttgcagaaattttaaagaatatt
aagaaaaatcaaaatttcaatgaagtaaaactgaaaaaacatcgttttcttcaagaaatt
ctcaaaaaaaacaactataattctttgactgagttaaaaaaaatacttattgatttgaac
gaatacggtgaagcaatccaagccgaaaaaatcgaaaggaatatgattctgagggatcat
attttcccaatcgttgatttttttaaccaatacattgatcacattgatgatgaagcatat
tttccttgtttaaccatgaaagacacttctaaaggaaaatctattgcattagaagtaaaa
tgtttcgctccacgcctaattactgatcccatttttaaagaaagttttgccacattatct
ttatctgggacattacatccgtttacatatacgcagctattgggacttaatgaatctgga
aaaaagttaaaaattataaaaatgaaacctccctttccaaaaaaaaatgcaaaagtactt
ttaacccgcgatcttaacacacgtggaaataatcgaacagcagaaacgtatcggagtatc
ctaattgcattaaaaccaatcttaatgaacactcctaaaaatgtaggtgtattttgtgct
tcttatgaagttttaaatgggttattggataacgattttgaacggctagcaaagatgtgc
aataaaaaagtataccatgaagaaatgggattaagtgctaaagataatgatgtaataatt
gaaaatttcaaagaacaaagtaccaaagaatcaggtaacggtgcggtgctattaggcgtc
tgtggtggaagaaatagtgagggggaagattttcctggagataatatgaatgccgttgta
gttgttggtataccgtttcaacgccctactcccagtggtaatgcaaagaataattattat
gagaagttatttcctggtaagggacgcctttttggatatacaattcccgctttacaacgt
tctaatcaagcctgtgggaggccaatacgaaaaatggatgatagaggtttgatagtatta
atggataataggttctggcaacatcgcgcctatttatcagactggatccagcaatctata
ataaaaatacctaataacaccactatcatcaaaagagaagttcaaagtttcttcttacat
gagtaa |
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