Promethearchaeum syntrophicum: DSAG12_02521
Help
Entry
DSAG12_02521 CDS
T06555
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
psyt
Promethearchaeum syntrophicum
Pathway
psyt04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
psyt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
DSAG12_02521
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psyt03019
]
DSAG12_02521
03009 Ribosome biogenesis [BR:
psyt03009
]
DSAG12_02521
04131 Membrane trafficking [BR:
psyt04131
]
DSAG12_02521
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psyt04147
]
DSAG12_02521
Messenger RNA biogenesis [BR:
psyt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
DSAG12_02521
Ribosome biogenesis [BR:
psyt03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
DSAG12_02521
Membrane trafficking [BR:
psyt04131
]
SNARE
SNARE associated proteins
Others
DSAG12_02521
Autophagy
Aggrephagy
Other aggrephagy associated proteins
DSAG12_02521
Exosome [BR:
psyt04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
DSAG12_02521
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
TIP49
AAA_5
AAA_33
AAA_2
CDC48_2
AAA_22
AAA_14
AAA_lid_PRS2_C
IstB_IS21
RNA_helicase
nSTAND3
AAA_28
NPHP3_N
Mg_chelatase
AAA_18
ABC_tran
Sigma54_activat
AAA_17
AAA_7
NACHT
ATPase
NB-ARC
TsaE
PhoH
DUF815
Parvo_NS1
AAA_3
ATPase_2
Zot
Zeta_toxin
AAA_11
SLFN-g3_helicase
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QEE16691
UniProt:
A0A5B9DCC4
LinkDB
All DBs
Position
2171197..2173509
Genome browser
AA seq
770 aa
AA seq
DB search
MAIGDMAPTDDERKIKSLRVSEIAKGSAGRFMCRMNIDIIKELELKPGEIVEIIGKRNTA
AILFPSSDKSDEIIRLDGLTRRNAGVAIGEYVKVRKCYYSVANKVVLSFIQSDLKISSEN
QIKLNLLNKPLKEGEIINVSGSNLAKKEQAGPYKDLKEMMPFLKSPTVSIGEVQFAVVDT
EPKGIVQIQNSTNIEIKEGFVAINTMGNITTYDDIGGLSDVIQRVREMIELPLKHPELFQ
RVNIDPPKGVLLHGPPGTGKTLLARAVSQEANATFITINGPEIMSKFYGASEERLRKIFK
EAETKAPSIIFIDELDSIAPKRENVSGEVERRVVAQLLALLDGLKGRGRIIVIGATNRIN
SIDEALRRPGRFDREIELQVPDADGRKEILQIHTRGMPLDDTVDLDEYARLSHGFVGADL
MAVAREGAMSSLRKILPKIDLDKPIPTEILDNLVINDDDFQNALRMVEPSAMREVLIEIP
NIAWDDVGGLNEVKQELQESIEWPLIYPHLYKKAGIRSVNGVLLFGPPGCGKTLLAKAVA
TESEINFLAIKGPEIFSKWVGESEKAIRDIFRKARLAAPSIIYFDELDAIAATRGGGMGN
MSGSNVGMQVVNQILVEMDGVEDRKGVIIVASTNRPDILDPALLRPGRFDRIVYVPSPDA
KGRKKILEVHTKDMPISEDVKLNFSDFAEQSEGYSGADLENVVREAGMQAIREQLEDFKE
VQLSNFEFAFKKIPPSLTPKLIQKYNEIADKLSQQKIRTIASLKDPGLFT
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggcaataggtgatatggctccaactgacgatgaaaggaagattaagtctctaagggtt
tcggaaatagcaaaaggttctgcaggaagattcatgtgcagaatgaatattgatataatt
aaagaattagaacttaaacctggtgaaattgtcgagatcattggaaaacggaatactgct
gcgattttatttccttcttcagataaatcggatgagataattcggttggatggattaaca
agacgtaatgctggtgtagctattggagaatatgttaaagttcgaaaatgttattattca
gttgcgaataaggtagttctgagttttatccaatcggatctaaaaatttcttcagaaaac
caaattaaattaaatttactaaataaacccttaaaagaaggggaaattattaatgtttct
ggctctaatttagcaaagaaagaacaagcaggaccttacaaggatttaaaggagatgatg
ccttttttaaaatctcccacagtttcaatcggggaagtccagtttgctgtagttgatact
gagccaaaggggatagttcaaatccaaaattctactaatattgaaattaaagagggattt
gtggcaattaatactatgggtaatatcaccacatatgatgatatagggggattatcggat
gtaatacaaagagtacgggaaatgattgaattacctctaaaacatcctgaactctttcaa
cgcgttaatatcgatcctcctaaaggtgttttacttcacggtcctcctggaacaggaaaa
actttattggctagagctgtttcccaagaagcaaatgcaacgtttatcaccataaacgga
ccagaaattatgagtaagttttatggtgcttctgaagaacgtttacgtaaaatcttcaaa
gaagcagaaactaaagcaccttcaataattttcattgatgaactcgattctatcgctcca
aaaagagaaaatgtttctggagaagtagaaagaagggttgtagctcaattattagccctt
ttagatggacttaaagggcgtgggagaataattgtaattggagcgactaataggatcaat
tctattgatgaagcattaagaagaccaggacgatttgatagagaaattgaattgcaggta
ccagatgctgatggaagaaaagaaattttgcagatacatacacgagggatgcctttagat
gataccgtagatttggacgaatatgcaaggctctctcatggatttgttggggctgatttg
atggctgttgcacgtgaaggtgcgatgtcgtctctgagaaaaattcttcctaagatagat
ttagataaaccaatacctacagaaattttagataatttagtcatcaacgacgacgatttc
caaaatgcattgagaatggttgaaccaagtgctatgcgcgaagttttaattgaaattcca
aacatagcatgggatgatgttgggggtttaaatgaagttaagcaagaattacaagaatct
attgaatggcccttaatttatccccacttatacaaaaaagcggggattcgttccgtaaat
ggtgttcttctatttggcccacctggttgtgggaaaactctactggcaaaagcagttgca
actgaatcagaaataaactttttggctataaaaggaccagaaatcttctcaaaatgggta
ggggaaagtgaaaaagccataagagacatcttcagaaaagcgagactcgcagcgccttct
attatttatttcgatgagcttgatgccattgctgccactagaggcggcggtatgggaaat
atgagcggttctaatgtaggtatgcaagttgtaaatcaaattcttgtagaaatggacggt
gttgaggatcgcaagggagtaataattgtagctagtacaaatcgtcccgatattcttgat
cctgctttattacgtccaggtcgttttgatcgcatagtttacgttccctctccagacgcg
aaaggtcgaaagaagatattagaggttcataccaaagatatgccaatttctgaagatgtg
aaattaaatttttctgattttgcagagcaatctgagggttatagtggtgcagaccttgag
aacgtagtacgtgaggcaggtatgcaagcaattcgtgaacaattagaagattttaaagag
gtacaattatctaattttgagtttgcttttaaaaaaatacctccttcattaactccaaag
ttaattcaaaaatataacgagattgcggataagctttctcaacagaaaatacgtacaatt
gcatctctaaaagatccaggattatttacgtga
DBGET
integrated database retrieval system
