Promethearchaeum syntrophicum: DSAG12_02591
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Entry
DSAG12_02591 CDS
T06555
Name
(GenBank) helicase C-terminal domain-containing protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
psyt
Promethearchaeum syntrophicum
Pathway
psyt03022
Basal transcription factors
psyt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psyt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DSAG12_02591
09124 Replication and repair
03420 Nucleotide excision repair
DSAG12_02591
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psyt03021
]
DSAG12_02591
03036 Chromosome and associated proteins [BR:
psyt03036
]
DSAG12_02591
03400 DNA repair and recombination proteins [BR:
psyt03400
]
DSAG12_02591
Enzymes [BR:
psyt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
DSAG12_02591
Transcription machinery [BR:
psyt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
DSAG12_02591
Chromosome and associated proteins [BR:
psyt03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
DSAG12_02591
DNA repair and recombination proteins [BR:
psyt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
DSAG12_02591
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
ResIII
DEAD
HBB
DUF5623
Motif
Other DBs
NCBI-ProteinID:
QEE16761
UniProt:
A0A5B9DCJ2
LinkDB
All DBs
Position
2252264..2254684
Genome browser
AA seq
806 aa
AA seq
DB search
MRIKKERHEIHLSVKDLIFASETQNYTVSSIPYNIRASKGTEIHQNYQEKKEESEENFKK
EVAIRIKRQIDDWTFYISGRADCIYNAGGFLIIEEIKSISNLSKLPLDSKIIKEYKQQLL
IYTHYFAHLQSEKEKKIKCRLVLIDIFTEEIKVIEVPLEDFTNYIRKQCRNILEIWKKET
QIKLNQRKRTKSIKFPFPTYRPNQEEIIEQTIKTLKESGRLLLSAPSGLGKTIGSLFPTL
KYILKKNLRLFIITSKTTQQKIYRDTLRMLEKKGGNFHSIILTAKEKMCINSAFICEKNF
CPFIENYEKIELTEPIEELLSNKVITARNIKKIAKKYGICPFELALDCSLSCDVIVGDYN
YVFHPFIKLKRYFDQSYDDAVLIIDEAHNLPFRAKDYYSPEITIQEIQDCRLYLNSISLP
KDIESEGMRIFKEINNYIKNLIDVNQNSNQNKTKIERIRQKYIIKLQEDFFRKQLKDYDQ
FILKYFQAYSDQNKTPPSKKDKILDFSMKLRQFYIILKESNNPEFTPLCYIKEKKIKILC
KSAAPKLEKQIKGFHSVIAQSATLFPMNYYQNMMGFPSNTHNLELNSPFAKENRLYLQFP
HVSTKYEYRNESYAIIAEIIGKTINIRNGNYIAFFPSFTYLKAVHEEIKKITLQGEILIQ
ESRMNERKRKEYLKKLKEPNHNYLLLAVHGGIFGEGVDFTGDMAIGAFIIGPGLPAYSLE
QELIKNYFDFKWKKGFEYAYRNIGITKVIQAAGRIFRTDSDKGVILLIGQRFNTPYYNKI
LPSDWNLEKVPNIIQKIENFWDFHNI
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgagaataaaaaaagagcggcatgagattcatctttcggtaaaagatttaatttttgct
agtgaaacccagaattataccgtttcttcaattccttataatattagagcttctaaaggg
accgagattcatcaaaattatcaagaaaaaaaagaagaatctgaagaaaatttcaaaaaa
gaagttgcaattcgaataaagagacaaattgatgattggacattttatatttccggtagg
gctgactgtatttataatgcaggtggttttcttattattgaggaaattaaatctatttca
aatctttcaaaattacctctcgattcaaaaataattaaagaatacaagcaacaattactc
atatacactcactattttgctcacttacaatctgaaaaagagaagaaaattaaatgcaga
ttggtcttgatagatatttttactgaagaaatcaaggttatcgaagtccccttagaagat
tttactaattatattagaaaacaatgcagaaatatcttagaaatctggaagaaagaaact
caaattaaattaaatcaacgtaaaagaacaaaatcaatcaaattcccgttcccgacatat
cgtcctaatcaagaagagattattgaacaaacaattaaaacactaaaggaaagtggtcga
ttattactctccgcaccatcaggattaggaaaaaccattggatctttatttcctacactt
aaatatatcctgaagaaaaacttgcgattattcatcataacttcaaaaacaactcaacaa
aagatatatcgagacactcttcgtatgctggaaaaaaaaggtggaaattttcattcgata
atccttacagcaaaagagaagatgtgcattaatagcgcctttatttgtgaaaaaaatttt
tgcccatttatagaaaattatgaaaaaatagaattaaccgaacctatcgaagaactactt
tcaaataaagtaattacggccagaaatataaaaaaaattgccaaaaaatatggaatttgt
ccatttgagttagctcttgattgttcactttcatgtgacgttattgtaggtgattataat
tatgtttttcatccatttattaagttaaagcgatatttcgaccaatcttatgatgatgct
gtattaatcatcgacgaagctcataatttgccttttcgagcaaaggattattattctcca
gaaattactattcaagaaatccaggattgtcggctatatttgaattctataagtcttcca
aaagatatagagtctgaaggtatgagaatttttaaggaaataaataattacataaagaac
cttatagatgtaaaccaaaattcaaaccagaataagacgaaaattgaaagaattcgacaa
aaatatataattaaactacaagaagattttttccgtaaacagctcaaagattatgatcaa
tttattcttaaatatttccaagcatattctgatcagaacaagacacctccgagtaagaag
gataaaatcctcgatttttcgatgaaattacgtcaattttatataatattaaaagaaagt
aataatccagaatttactccgctatgctatatcaaagaaaagaagatcaaaattctatgc
aaatccgcagctcctaaattagaaaagcaaataaagggttttcactctgtaattgcgcaa
tctgcaacattatttccaatgaattattatcaaaatatgatgggatttccatcaaatact
cataatttagagttaaattcaccttttgcaaaagaaaataggttatatcttcaatttcca
catgtttcaacgaaatatgaatatcgaaatgaatcttatgcaataattgcagaaattata
ggtaaaactattaatattcggaatggaaattacattgccttttttccgagttttacatat
ttaaaagccgtccatgaagaaattaaaaagataaccttgcaaggagagattttaatccaa
gaatcgagaatgaacgagcgaaaacgcaaagaatatttaaaaaagttaaaagaacctaac
cataattaccttttattagccgtccatggaggaattttcggtgaaggagttgattttaca
ggagatatggcgatcggggcatttattataggacctgggttgcctgcatattctttagag
caagaattaattaaaaattattttgatttcaaatggaaaaagggatttgagtatgcatat
cgaaatattggtataacaaaggtgatccaagctgctggaaggattttcagaacagattcg
gataaaggtgttatacttttaattggtcaacgttttaacacaccttattataacaagata
ttaccgagtgattggaatttggaaaaggtaccaaatattattcaaaaaattgagaatttc
tgggattttcacaacatttaa
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