Promethearchaeum syntrophicum: DSAG12_02714
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Entry
DSAG12_02714 CDS
T06555
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
psyt
Promethearchaeum syntrophicum
Pathway
psyt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psyt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DSAG12_02714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psyt03019
]
DSAG12_02714
03009 Ribosome biogenesis [BR:
psyt03009
]
DSAG12_02714
Enzymes [BR:
psyt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DSAG12_02714
Messenger RNA biogenesis [BR:
psyt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DSAG12_02714
Ribosome biogenesis [BR:
psyt03009
]
Prokaryotic type
rRNA helicases
DSAG12_02714
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
QEE16884
UniProt:
A0A5B9DCJ7
LinkDB
All DBs
Position
2398700..2400214
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AA seq
504 aa
AA seq
DB search
MLFTEMDINPQIIQALEENQIMSPTEIQEKSIPHGLSMQKSHVIGQAKTGSGKTLAFAIP
IIEKINPNNRNIQALVIVPTRELCKQNAVVFRSITKYKKIKIVEVYGGASIRSQIEQIQS
GGQVIIATPGRLNDLIRRRIIKFKSVNFVALDEADRMLDMGFLPDIEFVLLDAMRNISPR
LFLFSATLFDEIKKVIYKFTKKDVIHEIDVSKDSLTVDNCDQYAYYVKNNKFWNFIKILN
DERPAFSLIFTKTKRNAEKLCNRLNKANELNFNLKVGFINGDLSQAKREKTVSMFRNKQL
SCLVATNVLARGLDFPKVTHVFNYDMPRDPEDYVHRIGRTARVGGVERNVASGKAISIVS
DDQRVLMKKIEKLLNNNIEKRTIPNLSNMEFVPEKYDTTLKKNVKQKQKSNQGNKRQFDR
KKKNHKNIKKNSSKPEVIIKIVPEKLSTKSNSSQKLKTRSHYTSSKTSNNQFDKKRRNPK
FNNKKKKKKQFYSKNRQKISSSAK
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgttatttacagaaatggatattaatcctcaaattatacaagccttggaagagaatcaa
attatgtctcctaccgaaattcaggagaaaagtattcctcatgggctttcaatgcaaaaa
tcccatgttattggccaagccaaaactggttccggaaaaacactcgcttttgctattcct
attatcgaaaaaataaatccaaacaatagaaatatacaagcactagttatcgttccaact
cgagaattatgtaaacaaaatgcagtagtttttcgttctattacgaaatacaagaaaata
aagattgttgaagtgtatggtggagcttcaatacgttctcaaattgagcaaattcaaagt
ggtggacaagttataattgctaccccaggacggttaaacgatttaattagacgacgaata
attaagtttaagagtgttaattttgtcgctttagatgaagccgatcgaatgcttgatatg
ggatttcttccagatattgagtttgtgttattagacgcaatgagaaatatatctcctcgc
ttatttcttttttcagcaacattatttgacgaaatcaaaaaagttatttacaaatttact
aaaaaagatgttattcatgaaattgacgttagtaaagattccttaaccgtagataattgt
gatcaatacgcatattatgtgaagaataacaaattttggaattttattaaaattttaaat
gacgagcgaccagctttttcactcatttttactaaaactaaacgaaatgcagaaaaactc
tgtaatagattgaataaagcgaatgagctgaattttaatcttaaagtaggatttattaac
ggagatttatcacaagcaaaacgtgaaaaaactgtctctatgttccgtaataaacaacta
tcttgtttagttgcaacaaatgtccttgctcgaggattagattttcctaaagtcactcat
gtatttaattatgatatgccgcgtgatcctgaagattatgtccatcgtattggtcggact
gcgagggtaggaggagtagagagaaatgttgctagtggtaaagctatttctattgtttct
gacgatcagcgagttttaatgaaaaaaattgaaaagctcctcaataataatattgaaaaa
aggacaataccaaatctttcaaatatggaatttgttccagaaaaatacgatacgacttta
aagaaaaatgtaaagcaaaaacaaaaaagtaatcaaggaaacaaacgtcaattcgatagg
aaaaagaaaaatcacaagaatattaagaaaaatagtagtaaaccagaagttattattaaa
attgtaccagaaaaactctcaactaaatcaaattcttcacaaaaactaaaaacacgaagt
cattatacatcaagtaaaacttcaaataatcaatttgataagaaaagaagaaatcctaaa
tttaataataagaaaaagaaaaagaaacaattttattcaaagaatcgacagaagatatca
tcttctgcgaaataa
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