Promethearchaeum syntrophicum: DSAG12_02958
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Entry
DSAG12_02958 CDS
T06555
Symbol
endA
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
psyt
Promethearchaeum syntrophicum
Brite
KEGG Orthology (KO) [BR:
psyt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psyt03016
]
DSAG12_02958 (endA)
Enzymes [BR:
psyt01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
DSAG12_02958 (endA)
Transfer RNA biogenesis [BR:
psyt03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
DSAG12_02958 (endA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
QEE17126
UniProt:
A0A5B9DEF1
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All DBs
Position
2698029..2698655
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AA seq
208 aa
AA seq
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MENHKESASSEEIEKNGEDEFLKYEIVDGIFKNNKIEIKFSPSVQALYEKNYFGTLLPDG
SLELDVLEALLLIERSRLKIYSDTKEEMTAEQILSIVVEEDARIWVKYLVYRDLRQRGYM
VRLGYGEGLDFRVYPRGSTRSETIANYFIYILDEGNSIQLQNLDQITQQTLNARKKLIIV
TLDRLGDPTYYHLEQTKLPENSKKEDFW
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaatcataaagaatctgcttcatctgaagaaatagaaaaaaatggtgaagatgaa
tttttaaaatacgaaattgttgatggaatatttaaaaataataagatagaaataaaattt
tcacctagtgtgcaagctctttatgagaaaaattattttggaacattattaccagatggc
tccttagagttagatgttttagaagcgcttttacttattgaaagaagcagattaaaaatt
tatagtgatacaaaagaagaaatgaccgctgagcaaattctttcaatcgtagttgaagaa
gatgctagaatttgggtaaaatatttagtatatcgagatttacgacaacgcggttacatg
gtacgtttagggtatggagaaggtttagattttcgagtatatcctcgtggctcaacaaga
tcagagacaatagcaaactattttatatacattctggatgaaggaaattctattcaacta
caaaatttagatcaaataactcagcaaactcttaacgctcgaaagaaattgattattgtg
actctcgacaggttaggagatcctacatattatcatcttgaacaaacaaaacttcccgaa
aattccaaaaaggaagatttttggtaa
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