Promethearchaeum syntrophicum: DSAG12_03529
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Entry
DSAG12_03529 CDS
T06555
Name
(GenBank) MBL fold metallo-hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
psyt
Promethearchaeum syntrophicum
Pathway
psyt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psyt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DSAG12_03529
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psyt03019
]
DSAG12_03529
Messenger RNA biogenesis [BR:
psyt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DSAG12_03529
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GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
RMMBL
Lactamase_B
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
QEE17691
UniProt:
A0A5B9DF92
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All DBs
Position
complement(3348431..3349993)
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AA seq
520 aa
AA seq
DB search
MSLSFFGGVNEIGGNKIALVSSKGKGILLDFGWSFQISHDYLHSFLTLRKLRRLLDGIFI
GDLPKPLGELKGIYREDLYENIEKECRYQGILDDKPTNPEIIKEILISHAHSDHIGDIKL
LHPSIKLVCSTSTKFVLQQFEQTTNSNSLFSNILSYSIPGSKPKKNIFREITSLDSGETL
MCADSGLEIRLYEIDHSLPGASAYLIRDTISNKRIVYTGDIRKHGPLKEKSEEFIKLAKE
FKPDVLICEGTRADPAEDRNEYSSEQEVGKKITQVIQDAQKNESERLILFDCSLRDVWRL
QTFYNSCKNTGKILILSPKSYDLLKTCIEVGIISDVYLQDIFVLLSKKKSGTYTAKDYTN
SPSYVNILKKKEEDCLGAKSVYETLDVEKPFLINAEEIRKNPGKYVLQMSFYSLNDLFDI
NPVAGSYFILSKSEPFDDEGDVEERKLKNWFNLFKIPESNVYQVHCSGHMRREELIEMIK
EIHPQKIFPIHTKNAQIFTEMNLPQDIEVIKPEKGKKYHI
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgtctttttttggtggagttaatgaaatcggtgggaataaaattgccttggta
tcaagcaaaggaaaaggtattctgcttgattttggatggagttttcaaatctcacatgat
tacctgcattctttccttacccttaggaaacttcgccgtttacttgatgggatttttata
ggtgatttaccaaagccccttggagagctgaagggaatttatcgtgaagatctctatgaa
aatattgaaaaagagtgcagatatcaaggaatactcgatgataaaccaacgaaccccgaa
ataattaaagaaatcttaattagtcatgctcattctgaccatattggggatataaaatta
ttacatccatcaattaaattagtatgttcgacatccacaaaatttgttttacagcaattt
gaacaaactacaaattcaaattccctatttagcaatattttatcctatagtatccctggt
tctaaaccaaagaaaaatatatttagagaaatcacaagtttagattcgggggaaacgtta
atgtgtgcggatagtggattagaaataagattatatgaaatcgatcattctttacccggt
gcgagcgcttatctcattcgcgatactatttcgaataaaagaatagtttatacgggtgat
attagaaaacatgggcctctaaaagaaaaatctgaagaatttattaaattagctaaagaa
tttaaacccgatgtgttaatttgcgaaggaactcgcgcggatcctgctgaagatcgaaat
gaatattcttctgaacaagaagtaggaaaaaaaattacacaagttattcaagatgcacag
aaaaatgaatccgagaggttaattttatttgactgttccttaagagatgtctggcggttg
caaactttctataattcctgtaaaaatacagggaaaatcctaattctctccccgaaatca
tatgatctcttaaagacatgcatagaagtaggtataatttcagatgtttatcttcaagat
attttcgttttattaagtaagaagaaatctggaacttatactgcaaaagattataccaat
agcccgtcatacgttaatattttaaaaaagaaagaagaagattgtcttggagcaaaaagt
gtttatgaaaccttggatgtggaaaaaccatttctaattaacgctgaagagatacgaaaa
aatccggggaaatatgttcttcaaatgtctttttactctttaaatgacttatttgacatt
aatcccgtagcaggttcctattttattttatcgaaaagtgaaccttttgatgacgaagga
gatgttgaagaacgtaaattaaagaattggttcaatttatttaaaattccggaatcaaat
gtataccaagttcattgttctgggcatatgcgcagagaggaattaattgaaatgattaaa
gaaatccatcctcagaaaatttttccaattcatacaaaaaatgcccaaatttttacagaa
atgaatttacctcaggatattgaagtgataaaaccagagaaaggaaaaaaatatcatatt
tag
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