Psychrobacter sp. YP14: DLE54_00855
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Entry
DLE54_00855 CDS
T05488
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
psyy
Psychrobacter sp. YP14
Brite
KEGG Orthology (KO) [BR:
psyy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psyy03016
]
DLE54_00855
Enzymes [BR:
psyy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DLE54_00855
Transfer RNA biogenesis [BR:
psyy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DLE54_00855
Prokaryotic type
DLE54_00855
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PseudoU_synth_2
TPR_Slam
Motif
Other DBs
NCBI-ProteinID:
AWT48216
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All DBs
Position
199842..200882
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AA seq
346 aa
AA seq
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MMTEEIIQSAPAAPLKKSRVSGAILIDKPQGLTSQQVVSKVKYLLKSPLHDSKKAGHTGT
LDPMATGLLPVCLGEATKFSHYQLDADKAYQATIKLGIQTDTGDAEGQSIATAAIPKLTA
AELEAVAQQFMGDIKQIPPMYSALKKDGKKLYEYARAGIEIDRPARPITIQAISLNLGAQ
SDELILNVTCSKGTYVRVLGEDIAAALGTLGHLTALRRTQVGHFDIAEAVSLEALEDLSH
EQRLAYLLGIDACINGIPTLEVSDSQCARLHMGQRLNIKPQLDEDITNYIQAMLSQRQRH
SDADDSGKDEALDSVDIKLVNPKGEFLGLGAVELNGRLQPKKMIQR
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccgaagaaatcattcaatcagcgcctgctgctccgctcaaaaaaagccgagtt
tcaggggctattttaatcgataagccgcaaggtctgacctcgcagcaggtggtatctaag
gttaagtatctgcttaagtcacctttgcacgacagcaaaaaagccggtcatactgggact
ctagatcctatggcgaccggcttattgcctgtatgcttaggggaggcgactaagtttagt
cactaccagcttgatgctgataaggcgtatcaggccactattaagcttggcatacaaacc
gatactggagatgcagaagggcagagcattgctaccgcggctatacctaagctaactgcg
gctgagctagaggctgtggcgcagcagtttatgggagatattaaacaaataccgcccatg
tattctgcgctaaaaaaagacggaaaaaaactgtatgagtatgcccgcgccggtattgag
attgatcgtccggcacggcctatcactattcaagcaataagcttaaacttgggcgcgcag
tccgacgagctgattttaaatgtcacttgctcaaaaggcacctatgttcgagtgctggga
gaagacattgccgcagcgttaggcacgcttgggcatttaactgctctgcgccgtactcaa
gtgggacattttgatattgccgaagcagtaagtcttgaggcgcttgaggatctatctcac
gagcagcgcttggcttatttattgggtattgatgcctgtatcaatggcataccgaccctt
gaggtgtctgacagtcagtgtgctcgcctgcatatggggcaacgtcttaatatcaagcct
cagcttgatgaggacatcactaattatatacaggccatgttaagtcaacggcaacggcac
agtgatgcagatgatagtggtaaggacgaggcattagattcagtagatatcaagcttgtg
aaccctaaaggcgagtttttaggcttgggggcagtagagctaaatggccgcttacagccc
aaaaaaatgattcaacgttaa
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