Psychrobacter sp. YP14: DLE54_00935
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Entry
DLE54_00935 CDS
T05488
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
psyy
Psychrobacter sp. YP14
Pathway
psyy00470
D-Amino acid metabolism
psyy00550
Peptidoglycan biosynthesis
psyy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psyy00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DLE54_00935
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DLE54_00935
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psyy01011
]
DLE54_00935
Enzymes [BR:
psyy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
DLE54_00935
Peptidoglycan biosynthesis and degradation proteins [BR:
psyy01011
]
Precursor biosynthesis
Amino acid ligase
DLE54_00935
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Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
DAO
NAD_binding_8
NAD_binding_2
F420_oxidored
Pyr_redox_2
Shikimate_DH
Thi4
Pyr_redox
TrkA_N
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-ProteinID:
AWT50099
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Position
221917..223374
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AA seq
485 aa
AA seq
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MSHYTPAHTDQTEPQSGGLIQKGEGLQVVIGLGQSGLATANYLARRGYKVAVTDGNSAPK
LAEQLEPNISIRAFGDIDAELLLQASRIIISPGVSLATPAVAAAKQAGIAIVSDIQLFKE
ACKAPIVAITGSNAKSTVTTLVGQMAKDAGVKVGVGGNIGVPALSLLEDEALGEAMQLAV
LELSSFQLETVTNLGAKVATVLNMSPDHLDRHGDMLGYHQAKHRIFQGAQSVVVNRDDAL
SRPLIADNTPRLSVGSGAPDLGEYGLITEGDGRIYLAKGTEKLLAADQLKVKGKHNLVNA
LAALALGELAGLPKQSMLKTLQEFSGLPHRCQFVDNVAGVDYFNDSKGTNVGSTLAAISG
LGSVYGNQSGAKTKLMLILGGQGKGQQFGELVPLINKYVSQILLIGQDAELIESHLQQAN
LSGDVETHQCHDLAQAMTKANSLLSSSLSQVTAVLLSPACASLDQYPSYAKRGEHFCELV
VKLKD
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgcattacacccctgcgcatacagatcaaactgagccacaaagtggtggcctgatt
caaaaaggcgaggggctacaggtggtaatcggtctgggtcaatcaggtttggccacagcc
aactatctggcccgccgcggctataaggtggcggtaactgatggcaatagtgcccctaag
cttgctgagcagttagagccgaatatcagcattcgtgcatttggtgacattgatgcagaa
ctgttgttacaagcctcacgtatcattattagcccaggggtatcgctggcgacaccggct
gtggcggcggctaaacaggctggcattgccattgtgagtgatattcagctgtttaaagaa
gcgtgcaaggcgccgattgttgccattaccgggtctaatgccaaaagtaccgtcaccact
ttggtgggtcaaatggccaaagatgcaggcgtgaaggtgggcgttggtggcaatattggg
gtaccggcgctgagcctattagaagatgaggcgcttggggaggccatgcagcttgcggta
ttagagttgtcgagctttcagttagagacagtgaccaatcttggcgcaaaagtggctact
gtgcttaatatgtcgccggatcacttagaccgtcatggcgatatgctcggctaccatcaa
gccaagcaccgtatcttccaaggggcacagtcggtcgtggttaaccgtgatgatgccttg
tctcgccctttaattgcggataatacgccgcgtctaagtgtcggatctggcgcccctgat
ttgggcgaatatggtctaattacagaaggcgatgggcgcatttatttggccaaaggcact
gagaagttattggccgcagatcagctcaaagttaaaggcaagcataatctggttaatgca
ttagccgccttggcgcttggagagcttgctggcttgccaaaacagagcatgttaaaaacg
ttacaagagttttctggactgccacaccgctgtcaatttgtggataatgtggcgggcgtg
gattatttcaatgattctaaaggcaccaatgtcggctcaactttggcggccatttcgggt
ttaggctcagtgtatggcaatcaaagtggcgctaagaccaagttgatgctgattttaggc
gggcagggcaaaggtcagcagtttggcgagcttgtgcctttaattaataaatacgtcagc
caaatcctactgataggacaagatgccgagctaatagagtcgcatttgcagcaggccaat
ttaagtggtgatgtcgagactcatcagtgccatgacttggctcaggcgatgacgaaagca
aacagcttattatcgagcagcctatcacaagtaactgccgttttattatcgcctgcttgt
gccagcttagatcagtatcctagctatgctaagcgtggtgagcacttttgtgagctggta
gttaagctcaaagattag
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