Psychrobacter sp. YP14: DLE54_01315
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Entry
DLE54_01315 CDS
T05488
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
psyy
Psychrobacter sp. YP14
Pathway
psyy00020
Citrate cycle (TCA cycle)
psyy00190
Oxidative phosphorylation
psyy00650
Butanoate metabolism
psyy00720
Other carbon fixation pathways
psyy01100
Metabolic pathways
psyy01110
Biosynthesis of secondary metabolites
psyy01120
Microbial metabolism in diverse environments
psyy01200
Carbon metabolism
Module
psyy_M00009
Citrate cycle (TCA cycle, Krebs cycle)
psyy_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
psyy_M00149
Succinate dehydrogenase, prokaryotes
psyy_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
psyy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
DLE54_01315
00650 Butanoate metabolism
DLE54_01315
09102 Energy metabolism
00190 Oxidative phosphorylation
DLE54_01315
00720 Other carbon fixation pathways
DLE54_01315
Enzymes [BR:
psyy01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
DLE54_01315
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
HI0933_like
Thi4
Pyr_redox_2
GIDA
Pyr_redox_3
FAD_binding_3
FAD_oxidored
NAD_binding_7
TRIP13_N
Motif
Other DBs
NCBI-ProteinID:
AWT48300
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All DBs
Position
306567..308417
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AA seq
616 aa
AA seq
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MATRQDNTISNIKTLNYDSVIVGGGGSGMRAALQLAEGGMKVAVITKVFPTRSHTVAAQG
GIGASLGNMSDDNWHFHFYDTVKGSDWLGDQDAIEFMCREAPKVVYELEHMGMPFDRNPD
GTIYQRPFGGHTSNYGEKAVQRACAAADRTGHALLHTLYQKNLEAGTEFFIEWIALDLIK
DEKGDINGVVAIEQETGTVAVFQATNTVLATGGAGRIFSASTNAYINTGDGLGMAVRAGI
PLQDMEFWQFHPTGVFGAGVLLTEGCRGEGAILRNKDGEAFMERYAPTVKDLAPRDLVSR
SMDQEIKEGRGCGPNKDHIVMDMTHLGVETIMKRLPSVFEIGKNFANVDITKEPIPVIPT
IHYMMGGIPTTIHGQVIVPDLDGHVDEEGLYTEGKIVKGLYAIGECACVSVHGANRLGTN
SLLDLVVFGRAAGKHIIDNFGSSDHNYHPMNPRVLDFTVGRLNKLQQSTQGYNAQEVADE
IRALMQKHASVFRTQALMDEGVEKLLALKDKVDNIHLADKSQVFNTARIEALEVANLYEV
AKATMLSAAKRHECRGAHTVLDYDRPEDDPIAPNGRNDNEWMKHTVWYSEGNKIVYKPVR
KVPLTVDYVEPKVRVY
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggcaactagacaagacaatacaattagtaatattaaaaccctaaattatgactctgtt
atcgttggcggtggcggctcaggtatgcgtgcagcgctgcaattagcagaaggcggcatg
aaagtagctgttattaccaaagtattcccaacccgctcgcacaccgttgcagctcaaggt
ggtattggggcaagcttaggtaacatgagtgatgacaactggcacttccacttttatgac
accgtaaaagggtcagactggttgggtgaccaagacgctatcgaatttatgtgccgtgaa
gcgccaaaagtagtgtatgagcttgagcacatgggtatgccgtttgaccgcaacccagat
ggtacgatttatcagcgtccattcggtggtcacacttcaaactacggtgaaaaagcggta
caacgtgcttgtgcggccgctgaccgtactggccacgcattactacacactctatatcaa
aagaacttagaagcgggtactgagtttttcatcgaatggatcgcgctcgatcttattaaa
gatgaaaaaggcgacatcaatggtgtggtagccattgagcaagaaaccggcactgttgcc
gtattccaagccactaataccgtattagcgacgggtggtgcaggtcgtatcttctcagct
tctaccaacgcttacatcaataccggtgacggcctaggtatggcagtacgtgctggtatt
ccattacaagatatggaattctggcaattccaccccaccggtgtattcggtgcaggtgta
cttcttactgaaggttgccgcggtgaaggcgctatcttacgtaacaaagatggtgaagcc
ttcatggagcgttatgcaccaacggttaaagacttggcacctcgtgacctagtatcacgc
tcaatggaccaagagattaaagaaggccgtggttgtggtccaaacaaagatcacatcgta
atggacatgactcacttaggtgttgagaccattatgaagcgtctgccttctgtattcgag
attggtaagaactttgccaacgtcgacattactaaagagcctatcccagttatcccaacc
atccactatatgatgggcggtattccaaccaccattcatggtcaggttatcgtgccagat
cttgacggtcatgtggatgaagaaggcctatacacagaaggcaaaatcgttaaaggctta
tacgccattggtgagtgtgcttgtgtgagtgttcacggtgccaaccgtttaggtaccaac
tcattacttgacttggtggtattcggccgtgctgcgggcaaacacatcattgataacttc
ggtagctcagatcataactaccatccaatgaacccccgtgtactagacttcactgtgggc
cgtttgaacaagctacaacagtcaacacaaggctataacgctcaagaagtggctgatgaa
atccgcgccctaatgcaaaaacacgccagtgtattccgcactcaagcgttgatggatgaa
ggtgttgagaagttattggctctaaaagataaagtagataacattcatttggcagataag
tcgcaagtgttcaacaccgcgcgtattgaagccttagaagttgctaacctttacgaagtg
gccaaagccaccatgctatcagcggccaagcgtcatgaatgtcgcggcgcgcataccgtg
ttagattatgatcgtccagaagatgatccaatcgcaccaaacggccgtaacgataacgag
tggatgaagcatactgtttggtactcagaaggcaataagattgtttataagccggttcgt
aaagtaccgcttactgttgattacgttgaacctaaagtgcgtgtttactaa
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