Psychrobacter sp. YP14: DLE54_03310
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Entry
DLE54_03310 CDS
T05488
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
psyy
Psychrobacter sp. YP14
Pathway
psyy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psyy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DLE54_03310 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psyy03019
]
DLE54_03310 (groL)
03110 Chaperones and folding catalysts [BR:
psyy03110
]
DLE54_03310 (groL)
03029 Mitochondrial biogenesis [BR:
psyy03029
]
DLE54_03310 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psyy04147
]
DLE54_03310 (groL)
Enzymes [BR:
psyy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
DLE54_03310 (groL)
Messenger RNA biogenesis [BR:
psyy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
DLE54_03310 (groL)
Chaperones and folding catalysts [BR:
psyy03110
]
Heat shock proteins
HSP60 / Chaperonin
DLE54_03310 (groL)
Mitochondrial biogenesis [BR:
psyy03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
DLE54_03310 (groL)
Exosome [BR:
psyy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
DLE54_03310 (groL)
Exosomal proteins of other body fluids (saliva and urine)
DLE54_03310 (groL)
Exosomal proteins of breast cancer cells
DLE54_03310 (groL)
Exosomal proteins of colorectal cancer cells
DLE54_03310 (groL)
Exosomal proteins of bladder cancer cells
DLE54_03310 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AWT48658
LinkDB
All DBs
Position
complement(772772..774418)
Genome browser
AA seq
548 aa
AA seq
DB search
MAKDVKFGIDARKQMMDGVNVLANAVKVTLGPKGRNVVIDKSFGAPAITKDGVSVAKEIE
LENKFENMGAQLVREVASKTNDVAGDGTTTATVLAQAILVEGMKSVAAGMNPMDLKRGID
KAVAAAVEEIHNISTPADDSKAIAQVGSISANSDTKIGELIAEAMDKVGKKGVITVEEGS
GFEDSLEVVEGMQFDRGYISPYFANKQDSLTAEFENPYILLVDKKISNIREIVPLLEQVM
QQSKPLLIIAEDVENEALATLVVNNMRGGLKTCAVKAPGFGDRRKAMLQDIAILTGGTVI
SEEVGMSLETATIEQLGTAKKVTVGKENTVIVDGAGNKADIEARVESINRQIEESTSDYD
KEKLQERVAKLSGGVAVIKVGAATETAMKEKKDRVDDALHATRAAVEEGVVPGGGVALVR
ALNALADLKGDNEDQNAGINILRRAMEAPLRQIVTNAGDEASVVVNEVKNGSGNYGYNAA
TGVYGDMLEMGILDPAKVSRSALEHAASVAGLMLTTEAMITDKPQSDDPMAGMGGAGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagacgtaaaatttggcattgacgctcgtaaacaaatgatggacggcgttaac
gttctagcaaacgctgtaaaagtaaccctaggtcctaaaggccgtaacgtggttatcgat
aaatcttttggcgcccctgccatcactaaagatggggtttctgttgctaaagaaatcgaa
cttgaaaacaaatttgaaaacatgggtgctcagctggtacgtgaagtagcgagcaaaacc
aatgatgtggccggtgacggtaccacgactgcaactgtattggctcaagccattcttgtt
gaaggcatgaaatctgttgctgctggcatgaacccaatggatcttaagcgcggtatcgat
aaagcagttgctgctgcggttgaagagatccacaacatctctaccccagctgatgactct
aaagccattgctcaagtgggctctatttctgctaactctgacaccaaaattggtgagcta
atcgctgaagccatggacaaagtgggcaaaaaaggcgttatcaccgttgaggaagggtca
ggctttgaagactcattagaagtggttgaaggcatgcagtttgaccgtggctacatcagc
ccatactttgcaaacaagcaagacagcctaactgctgaatttgaaaacccatacatccta
cttgttgacaaaaaaatcagcaatatccgtgaaatcgtgccattacttgagcaagtaatg
cagcaaagcaagccactgttaatcatcgctgaagatgttgaaaacgaagcgttggctact
ttagttgtgaacaacatgcgcggtggtctaaaaacttgtgccgtgaaagccccaggtttt
ggcgatcgtcgtaaagccatgctacaagacatcgctatcttaactggtggtacggtgatt
tctgaagaagtgggcatgagccttgaaacagcaaccatcgagcaactaggtaccgctaag
aaagtaaccgttggtaaagaaaacacggttatcgttgatggcgctggcaacaaagctgat
atcgaagcgcgcgttgagtcaatcaaccgtcaaatcgaagagtcaacttctgattacgac
aaagaaaaactacaagaacgtgtggctaagctttcaggcggcgttgctgtgattaaagta
ggtgcagcgactgaaacagctatgaaagagaagaaagaccgtgttgacgatgcgctacac
gcaactcgtgctgcggtagaagaaggcgtggtacctggcggtggtgtggctctagtacgt
gcactaaatgcacttgctgacctaaaaggtgacaacgaagatcaaaacgcaggtatcaat
attctacgccgtgcgatggaagcccctctacgtcaaatcgtaaccaacgcaggtgatgaa
gcgtctgttgtggttaacgaagtgaaaaacggttctggtaactatggttacaacgcagca
actggcgtctatggcgatatgttagagatgggtatccttgatcctgctaaagtatctcgc
tcagcactagagcatgctgcctcagtagctggcttaatgctgaccactgaagcgatgatc
actgataagccacaaagtgatgacccaatggcaggcatgggcggtgctggtatgggcggc
atgggtggtatgggcggcatgatgtaa
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