Psychrobacter sp. YP14: DLE54_03760
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Entry
DLE54_03760 CDS
T05488
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
psyy
Psychrobacter sp. YP14
Brite
KEGG Orthology (KO) [BR:
psyy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psyy03400
]
DLE54_03760
Enzymes [BR:
psyy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
DLE54_03760
DNA repair and recombination proteins [BR:
psyy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
DLE54_03760
Prokaryotic type
DLE54_03760
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GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AWT48731
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Position
complement(874402..876057)
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AA seq
551 aa
AA seq
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MSHSYKVSALMWFRRDLRLHDNTALTLLLDQVVQASQHTESCLQAVFVMTPKQWLAHDMS
ISQVDLMMRTLTHLTNDLNHKLGMKLSVLQAESYSDSIDVIEAFCVDNHITHVGCNYEYE
VNEQQRDTALAKRLSKLNIKFNQYHDQCILPPNTIKTGDDTLYKVFTPFYKKWQQTLEIS
PPVLYDTNSLAEGDIKQKLTDLNINQASTDTSSTQHTSSMQSIKDSHQSVLQRFTSHYQL
SENNAETIPILESARAAYPAGEQAAIDRLNGFVQQDIEEYGITRDQPALMGTSQLSAYLT
LGMISPRLCYLTADARLESKSFADENLADSESELEIFENNSKSDVERWISELAWRDFYRH
VIVDRPDIVKGAAYKKDTDNKLNWSYDNDDFQAWCQGMTGVPLIDAAMRCLNQTGFMHNR
LRMVTAMFLTKDLFIDWRLGERYFMQNLIDADFASNNGGWQWSASTGTDAAPYFRIMNPF
SQAKTHDKDAIFIKSWLPELKDIPANILHDENKLRKALSKQGAFAHVNYPLPMVEHKQAR
RYAIEQFKARG
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgtctcactcttataaagtatcggcgcttatgtggtttcgtcgtgacctacgcttgcat
gacaataccgcattgacgcttttgctagatcaagttgtgcaagcctcacaacacacagag
tcctgtcttcaagctgtgtttgtgatgaccccaaagcagtggcttgctcatgacatgtct
atctcacaggttgacttgatgatgcgtaccctgacgcatttaacaaatgacttaaatcat
aagctaggtatgaagctatcggtattacaagctgagtcgtattcagatagtattgatgtt
atcgaagctttttgtgtcgacaatcatattacccatgtgggctgtaactatgagtatgaa
gtcaatgagcagcagcgtgataccgcattagcaaagcggctgtctaaacttaatattaaa
tttaatcaataccacgaccaatgtatcttgccgcccaataccatcaaaaccggtgatgat
accctgtataaagtcttcaccccattttataaaaaatggcagcagacattagagataagc
ccccctgttttgtatgatactaacagcttagctgagggtgatatcaaacagaaattaacc
gacttaaacatcaatcaagcttcgacagatacaagcagcactcaacataccagctcgatg
caatctataaaagacagtcatcaatctgtactacagcgctttacatcccattatcagctc
tcagagaataatgctgaaacgataccgatacttgagtcagctagagcggcctaccctgcc
ggtgagcaagccgcgatagaccggctaaatggctttgtgcaacaagacattgaagaatat
ggcataacgcgtgatcagcctgccttgatgggcaccagtcagctgtcagcctatctaacg
ctaggaatgattagcccgcgcttatgctatctaaccgccgacgcaagactagaatctaaa
agctttgcagacgaaaatcttgcagacagtgaatcagagcttgaaatatttgagaataac
agcaaaagtgatgtcgagcgctggataagtgagctggcttggcgtgacttttatcgtcat
gtgattgtcgatagacctgacatcgtcaaaggcgctgcttataaaaaggacactgacaat
aagctaaactggtcatacgataacgatgactttcaagcgtggtgtcaagggatgacaggg
gtgccgcttatcgatgcagccatgcgctgcctgaatcaaactggctttatgcacaatcga
ctgcgtatggtgactgcgatgtttttgaccaaagatttgtttattgattggcgcttaggc
gagcgttattttatgcaaaatctgattgatgcagactttgcgtctaacaatggcggctgg
caatggagcgcttcaacaggcaccgatgcagcgccctactttcgtatcatgaacccgttt
agccaagccaaaacgcatgataaggatgccatttttattaaaagctggctacctgagctt
aaagacataccggctaatatactgcatgatgaaaacaaactgcgtaaagcccttagcaaa
caaggcgcgtttgctcatgttaactaccctctacctatggtagaacacaaacaagcgcgc
cgttatgccattgagcagtttaaggctcgtggctaa
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