Psychrobacter sp. YP14: DLE54_03800
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Entry
DLE54_03800 CDS
T05488
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
psyy
Psychrobacter sp. YP14
Pathway
psyy02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
psyy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DLE54_03800
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psyy02000
]
DLE54_03800
02044 Secretion system [BR:
psyy02044
]
DLE54_03800
Transporters [BR:
psyy02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
DLE54_03800
Secretion system [BR:
psyy02044
]
Type I secretion system
Adhesin protein transporter
DLE54_03800
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
AAA_29
AAA_18
ABC_ATPase
Mg_chelatase
dNK
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AWT48738
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Position
884381..886984
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AA seq
867 aa
AA seq
DB search
MSTNQNPENNLGPKSSGASPDHTDGLGELVSSDQQLTTAQSLADALKHILSQQGYPVDNI
RLQDVIRKHDTSRAIEQGRGINTLGGIVEVLRGLGIEESPEILQQPDAAFLPLLAYHIRY
GWGVIDGKSPQGSWNLRQEAFTHPASLDEVKLVLRLRLKENHIKKRNANFSDLLKKDLFR
YKGVVIEAVIASFLINFLALAVSLFSMQVYDRVIPTRSQYTLIILASGVALIIIFESFMK
FARSKIMDKVVVGLDQYLSREVFQRLLRVRIDQMPGSVGSMAAQLRGYEQVRSFFTASTL
FGLVDLPMTILFITLIAYIGSPLVALVPIIAAIIAVTMGLTARKRIDAIAAEGASASYYK
TGLLVETVEGVETIKAGAGSWKFLSRWLDVMNITIKNDLNMKHANDNLSYFAQMLQQFSY
VGIVIVGSFVVMSGDMTMGGLIACSILGGRVLAPVMAIPNLLVQYSHAKAAKSMIESIFA
LEQDNHGVNYPLSPTKIRGHYQCDDLVFNYTGNDRPAVSVKRLVIQPGERIAILGPIGSG
KSTLLKLLSGLYAPTSGRILLDGLDIQQISRESLSEQVGYLQQDHRLFQGTLRENLLIGM
PAPNDDVLHDALQKTGLINLVSNHSSGLDLPISEGGRGLSGGQKQLVAFTRLLLTKPSVL
LIDEPTASMDNRQEQRCLQVLRHELQQGQTLVVSTHKTALLDLVDRIIIMDNHQIVMDGP
KEAVLKQLMQNEQAKRQGSNEQITQQQAPRAAIQATAKGPNSPQPGTPPNAPQSQDPAGQ
PQHPKPAVDDINAANSGQAPSRPANQQIVIKPASEIKATQTPSADVNATTNQSQSTSQIN
QAGAEDQRAASTAVKSSIVINPKSEEK
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgagtactaatcaaaatccagaaaacaatctaggccccaaaagctcgggagcgtcaccg
gaccatacagatggcttgggtgagttggtcagtagtgaccagcagttaaccactgcccag
tctttggccgatgcactcaaacatattttaagccagcaaggctatccggtagacaatatc
cgtttgcaagatgttattagaaagcatgatacctctcgggcgatagagcagggcagaggc
atcaataccttaggcggtattgtcgaggtgctcagaggtctaggtattgaagagtctcca
gagattttacagcagccagatgcagcatttttaccgcttctggcgtatcacatcagatat
ggctggggagttattgacggtaagagcccacaagggtcttggaatctacgccaagaggct
tttacccatccggcaagcttagatgaagtcaaactggttttacgcctgcgtctaaaagaa
aatcatatcaaaaagcgcaacgccaactttagtgatttactaaaaaaggatttgtttcgt
tacaaaggcgtcgtgatagaagccgttatcgcctccttcttaattaacttcttagcgtta
gcggtgtctttattctcaatgcaagtgtatgaccgagtcattccgacccgaagtcaatat
acgctgattatcttagccagtggtgtggcactgattattatctttgaatctttcatgaaa
tttgcacgctctaaaatcatggataaggtggtggtagggctcgatcagtatttatcacgt
gaagtgtttcagcgtctgctccgagtgcgtatcgaccaaatgccaggctcagtaggctct
atggcggcacagttaaggggctatgagcaggtacgtagcttttttacggccagtactcta
tttggtctggttgatttacctatgaccatattatttatcacgttgattgcttatattggc
tcacctttggtggcattggtgcctattattgccgctattattgccgttactatgggatta
acagcacgcaaacgtattgatgccattgccgctgaaggtgcttctgcctcctactacaaa
accggtctattggttgaaacggtagaaggggttgaaaccattaaagcaggggcgggtagc
tggaagtttttatcgcggtggcttgatgtgatgaacatcaccatcaaaaacgatttaaac
atgaaacacgccaatgataatttaagttattttgcgcagatgctgcagcagtttagttat
gtgggtattgtgattgtcggctcttttgtggtgatgagcggtgatatgacaatgggtggc
ctaattgcctgttctatcttgggcgggcgtgtattggcaccggttatggccattccaaac
ttattggtacagtactcgcatgccaaggctgcaaaaagcatgattgagtctatctttgcg
ctagagcaagataaccatggggtaaattatccgttgtctcctaccaaaatccgtggccat
tatcagtgtgatgacttggtatttaattacaccggtaatgatcgtcctgctgtgagtgtc
aaaaggctggtcattcagcctggggagcgtatcgctattttaggccccattggttcaggc
aaatctactttattaaaactgctctcaggtctatacgcacccacctcaggacgtatcttg
ttagatggattagatattcagcaaattagccgtgaatcgctgagcgagcaggtaggctac
ttacaacaagatcaccgcttgttccaaggcacactgcgtgaaaacttacttatcggtatg
cctgcacccaatgatgatgtgctccatgatgcgctgcaaaagacaggactgattaatctg
gtatcgaaccactcaagcggcttggatttgccgattagtgaaggcggccgaggtctgtcc
ggtggtcaaaagcagctggtggccttcacgcgtttgctacttactaagccatcagtgtta
ttaattgatgagccgaccgcttctatggataaccgtcaagaacagcgctgcttgcaggta
ctgcgccatgagctgcagcaaggtcagactttggtggtatcgactcataaaacagcgcta
cttgacttggtagatcgcattatcattatggacaaccatcagattgtgatggatgggcca
aaagaggccgtgcttaaacagttgatgcaaaatgagcaagccaaacgccaaggcagtaat
gagcaaattactcagcagcaagcgccaagagccgccatacaggctacggcaaaaggccct
aattcgccccagccaggaacgccgccgaacgcccctcagtctcaagatcctgcaggtcag
ccgcaacatccaaagccagcggttgatgatataaatgccgccaatagcggacaagcgcca
agccgtcctgccaatcagcagattgttattaaaccggcctctgagataaaagctacgcag
acgccaagtgcagatgttaacgccactaccaatcaatcacagtcaacatcacagatcaac
caagctggcgctgaagaccaaagagcggcatcaacagctgttaaaagtagtattgtcatt
aacccaaaatctgaagagaagtag
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