KEGG   Psychrobacter sp. YP14: DLE54_04955
Entry
DLE54_04955       CDS       T05488                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
psyy  Psychrobacter sp. YP14
Pathway
psyy00521  Streptomycin biosynthesis
psyy00523  Polyketide sugar unit biosynthesis
psyy00525  Acarbose and validamycin biosynthesis
psyy00541  Biosynthesis of various nucleotide sugars
psyy01055  Biosynthesis of vancomycin group antibiotics
psyy01100  Metabolic pathways
psyy01110  Biosynthesis of secondary metabolites
psyy01250  Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:psyy00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    DLE54_04955 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    DLE54_04955 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    DLE54_04955 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    DLE54_04955 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    DLE54_04955 (rfbB)
Enzymes [BR:psyy01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     DLE54_04955 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase Polysacc_synt_2 RmlD_sub_bind 3Beta_HSD NAD_binding_4 adh_short KR Gp_dh_N
Other DBs
NCBI-ProteinID: AWT48946
LinkDB
Position
1149797..1150858
AA seq 353 aa
MKILITGGAGFIGSAVVRHIISCTEDEVLNIDKLTYAGNLESLTSVEDSARYQFKRIDIC
DRAAVEQVFESFQPDAVMHLAAESHVDRSIDGPAEFIHTNIIGTYTLLEVARQYWQSLNE
HNKQSFRFHHVSTDEVYGDLENTSDLFTETTAYAPSSPYSASKASSDHLVRAWHRTYGLP
VVITNCSNNYGPYHFPEKLIPLVILNALEGKALPVYGKGNQIRDWLYVEDHARALYKVIT
EGLTGETYNIGGHNEKQNIDVVKTICQILDELQPQANGQSYESLITFVKDRPGHDLRYAI
DARKIYNKLGWQPEESFESGIRKTVQWYLANLDWCRRVQDGSYQRERLGVQPE
NT seq 1062 nt   +upstreamnt  +downstreamnt
atgaaaatactgattactggcggtgcaggcttcattggttctgcggttgtccgtcatatt
ataagctgcaccgaagatgaagtgttaaatattgataagctgacttatgcaggaaaccta
gagtcattaacgtctgttgaggatagcgctagatatcaatttaaacgaatagatatctgt
gatagagccgctgttgagcaggtatttgaaagttttcagccagatgctgtcatgcattta
gccgcagaatctcatgtcgaccgctctattgatggacctgcagaatttattcataccaac
attattggtacttatacgttattggaggttgctcgtcagtattggcaatctcttaatgag
cacaataagcagagctttcggtttcatcatgtctcaacagatgaggtctatggtgactta
gaaaatacttctgatttatttaccgaaaccacagcttatgctccaagctcgccttattca
gcctctaaggccagctcagatcatttggtgagagcgtggcatcgtacttatggtctacca
gttgttattaccaattgctctaataattatggcccctatcactttcctgaaaagctaata
ccgctagttatattaaatgcacttgagggtaaggcgttgcctgtatatggtaaaggcaat
caaatccgtgactggctttatgtagaagaccatgcgcgtgctttatataaagtgattaca
gagggtttgacaggtgagacttacaatattggtggtcataatgagaagcaaaatattgac
gtggttaagaccatttgtcagatattagatgagctacaaccacaggcgaatggtcagtct
tatgagtctcttattacttttgttaaagaccgcccaggccatgatctccgttacgccatt
gatgctcgtaaaatatacaataaacttggttggcagcccgaggagagctttgagtctggc
atacgtaagacagtacaatggtatttggcaaatctagactggtgtcgacgtgtacaagac
ggtagttatcaacgtgaaagactgggagtacagccagaatga

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