Psychrobacter sp. YP14: DLE54_04955
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Entry
DLE54_04955 CDS
T05488
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
psyy
Psychrobacter sp. YP14
Pathway
psyy00521
Streptomycin biosynthesis
psyy00523
Polyketide sugar unit biosynthesis
psyy00525
Acarbose and validamycin biosynthesis
psyy00541
Biosynthesis of various nucleotide sugars
psyy01055
Biosynthesis of vancomycin group antibiotics
psyy01100
Metabolic pathways
psyy01110
Biosynthesis of secondary metabolites
psyy01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
psyy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
DLE54_04955 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
DLE54_04955 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
DLE54_04955 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
DLE54_04955 (rfbB)
00525 Acarbose and validamycin biosynthesis
DLE54_04955 (rfbB)
Enzymes [BR:
psyy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
DLE54_04955 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
adh_short
KR
Gp_dh_N
Motif
Other DBs
NCBI-ProteinID:
AWT48946
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All DBs
Position
1149797..1150858
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AA seq
353 aa
AA seq
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MKILITGGAGFIGSAVVRHIISCTEDEVLNIDKLTYAGNLESLTSVEDSARYQFKRIDIC
DRAAVEQVFESFQPDAVMHLAAESHVDRSIDGPAEFIHTNIIGTYTLLEVARQYWQSLNE
HNKQSFRFHHVSTDEVYGDLENTSDLFTETTAYAPSSPYSASKASSDHLVRAWHRTYGLP
VVITNCSNNYGPYHFPEKLIPLVILNALEGKALPVYGKGNQIRDWLYVEDHARALYKVIT
EGLTGETYNIGGHNEKQNIDVVKTICQILDELQPQANGQSYESLITFVKDRPGHDLRYAI
DARKIYNKLGWQPEESFESGIRKTVQWYLANLDWCRRVQDGSYQRERLGVQPE
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatactgattactggcggtgcaggcttcattggttctgcggttgtccgtcatatt
ataagctgcaccgaagatgaagtgttaaatattgataagctgacttatgcaggaaaccta
gagtcattaacgtctgttgaggatagcgctagatatcaatttaaacgaatagatatctgt
gatagagccgctgttgagcaggtatttgaaagttttcagccagatgctgtcatgcattta
gccgcagaatctcatgtcgaccgctctattgatggacctgcagaatttattcataccaac
attattggtacttatacgttattggaggttgctcgtcagtattggcaatctcttaatgag
cacaataagcagagctttcggtttcatcatgtctcaacagatgaggtctatggtgactta
gaaaatacttctgatttatttaccgaaaccacagcttatgctccaagctcgccttattca
gcctctaaggccagctcagatcatttggtgagagcgtggcatcgtacttatggtctacca
gttgttattaccaattgctctaataattatggcccctatcactttcctgaaaagctaata
ccgctagttatattaaatgcacttgagggtaaggcgttgcctgtatatggtaaaggcaat
caaatccgtgactggctttatgtagaagaccatgcgcgtgctttatataaagtgattaca
gagggtttgacaggtgagacttacaatattggtggtcataatgagaagcaaaatattgac
gtggttaagaccatttgtcagatattagatgagctacaaccacaggcgaatggtcagtct
tatgagtctcttattacttttgttaaagaccgcccaggccatgatctccgttacgccatt
gatgctcgtaaaatatacaataaacttggttggcagcccgaggagagctttgagtctggc
atacgtaagacagtacaatggtatttggcaaatctagactggtgtcgacgtgtacaagac
ggtagttatcaacgtgaaagactgggagtacagccagaatga
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