Psychrobacter sp. YP14: DLE54_05350
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Entry
DLE54_05350 CDS
T05488
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
psyy
Psychrobacter sp. YP14
Pathway
psyy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psyy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
DLE54_05350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psyy03400
]
DLE54_05350
DNA repair and recombination proteins [BR:
psyy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
DLE54_05350
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_T
ExoX-like_C
QSregVF_b
Motif
Other DBs
NCBI-ProteinID:
AWT49012
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All DBs
Position
complement(1257433..1258146)
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AA seq
237 aa
AA seq
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MTTYILDTETTGLVDPHMTEAAYSIIAINNAKIEVIQAPRSKRFNPLKPISLGSMATSHI
CDEDVAHEPPHTEFRLPNSVEYLVGHNIDYDMAVLKNAGVTHTPKLICTKAMSSYLLPTL
ESHKLVSLLYHFHRQVAREQAKHAHAAIYDIYFTQLVLGSLIELANSQGHNITDVESLYQ
FSEMARIPTHLSFGKYKGQAITELAASSDGAGYLKWLMGQDSIDPYLAEACQQALNS
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgaccacttatattttagacaccgaaaccacagggctggtagatccacatatgacggaa
gcggcctatagcattattgccattaataatgcaaaaatcgaggttatccaagccccccga
tccaagcgcttcaatccactaaaaccgataagcttgggctctatggcgacctcacacatt
tgtgatgaggatgtggctcatgaaccgccacacacagagtttcgtttgccaaacagcgtc
gaatacctagtcggccataacatagactatgatatggcggtactaaaaaatgccggcgtc
acccacacgcccaagctcatttgtaccaaagcaatgtcaagctatctactgccgactctt
gagagtcataaactggtatcactgctgtatcactttcaccgtcaagtggcacgcgagcaa
gccaagcacgcgcacgctgctatttatgacatctattttacccagctagtacttggcagc
ttaattgagcttgccaatagccaaggtcataacattacagatgttgaaagcttgtatcaa
tttagcgaaatggcgcgcatccctactcacttaagctttggtaaatataaaggccaagcc
attactgagttagccgcaagctctgatggcgcaggttatctaaaatggcttatgggtcaa
gacagcatagacccttatttggctgaggcttgccagcaggcactcaactcttaa
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