Psychrobacter sp. YP14: DLE54_05470
Help
Entry
DLE54_05470 CDS
T05488
Name
(GenBank) chromosome segregation protein SMC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
psyy
Psychrobacter sp. YP14
Brite
KEGG Orthology (KO) [BR:
psyy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psyy03400
]
DLE54_05470
DNA repair and recombination proteins [BR:
psyy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DLE54_05470
Archaeal homologous recombinant proteins
DLE54_05470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
ABC_tran
SMC_N
GTP_EFTU
MMR_HSR1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AWT49034
LinkDB
All DBs
Position
complement(1292879..1296919)
Genome browser
AA seq
1346 aa
AA seq
DB search
MRLIELRLKNLNSLKGEWRIDFSDEAYINEGIFAIIGHTGAGKTTILDAICLALYGETPR
ISNISKSTNEVMTRQTGECLAEVVIDINGTHYRCHWYQRRAHGKPDGNLQDATHELSLAS
DHEGQKAGTVLEEKSSLTKKRIVELTRMDFQQFTRSILLAQGSFAAFLSAKADERADILE
KITGTDIYATISERVHEKKRQEEALLNTLQAKLQGLELLDVEAETQLKQQLEANTKQLTD
NRAIVSQLEDQLTWITEVEQLTEQVVTLNADVAVSIQAKTAFEEDAKRLERANKALEIES
HYTQVRNLRASKHQLDQELSNKQQQIPVLQQQLDEQQTQMTQAQKREASANQVLNDTLPV
IEQTRQLDNQIEQKQLTLKQQQQLQHTHQQSLAEFKATITRLISDKSQTQQQLAEVDSYL
QQYQHHSQLNVDISGLNTLGLTLKAELENNYKLYQQQHLKEQENKDLTQQLNALKQEQAT
NQALYETKQAKLTELYHAQQALLQGQPLAALRQQQEHNDALSTQLSILQQHLDNKAELAT
QISAEKAVTTQFDSDMADLQSAIEQAEQDLEMLNRHQQDKQSQVEQQQKIIELEAKLEDY
IELLAHNQPCPLCGSTEHPSVANKKSNSSEAHTKLHQLKDELSQIVAKINRAKQNLDDAK
LAYKNTEYKQQQSHAQLTNQLQRLNTTLSQILNHTNTLSEQLSAAPTVLQQQLLNSSAHL
HETDPQSSDPKNHQNDQQPAAPKPALLLKLSQLTADFDSQPNQQQLEALLATGKQITACI
YDAQQRLHHQKQQIKQSLEEQDALTQQITDIEKRHKAIEADNQRLMMHIKDIEAKQQLNQ
HSITQATAFIDQGFSKLGESVQQLQGLLDKYKDSAAINDASQTLTDCEQSLAQLRHCMNN
QQHLDDKQCYDSLQPLRNLSQWMGALNNSYAAKLASKQQLFTEIQTLDTQLKSNQAQADK
EHSQLALLSDTIRQLSHEMTQLQSRRRDLFGDKQVNSEDSRLRAALDSAKDQLNQIIKEH
SHTQHQLSTLQAESLRLETQLSELQSQLAQQEHALGTQLLAHDFDSEADYLAARLPKEQR
DALNQRQQEIVNALNYAQNALKTVEHQLQHKTANPQTTDTKENLQAQRQQQQDLVDELIE
QVGGINQQLQTNEARKTDQRSQLEKIAEQKQKLKVWQELYGLIGSADGKKYRTFAQGLTF
EIMVSNANTQLRKMSDRYILVRDENSPLELNVIDDYQGGLIRSTKNLSGGEGFLISLALA
LGLSSMASQNIRVDSLFLDEGFGTLDEDSLDVALNTLTNLQQEGKLIGIISHVQALKDRI
HTQIRVDKLSGGYSKLSGPGCSAVKD
NT seq
4041 nt
NT seq
+upstream
nt +downstream
nt
atgcgactgattgaattacgactcaaaaacctaaattctttaaagggcgaatggcgcatc
gactttagcgatgaagcctatatcaacgaaggtatttttgccattattgggcacacaggc
gcaggcaagaccaccattttggatgccatttgcttagcgctatatggagaaacaccgcgg
atcagtaacattagtaaatcgaccaatgaggtgatgactcgccaaactggggagtgtctg
gccgaagtggtgattgatataaatggcacacattaccgctgtcattggtatcagcgccgt
gcccatggtaagcctgacggtaacttgcaagacgccacccatgagctgtcccttgccagc
gatcatgagggacaaaaagccggtacggttcttgaagaaaaatcatcgctgaccaaaaag
cgaattgttgaacttacccgtatggactttcagcaattcacccgctccatcttattggct
cagggcagctttgcggcatttttaagcgccaaagccgatgagcgtgccgacatcttggag
aagataaccggcaccgatatttatgccaccatctctgagcgagtgcacgaaaaaaaacga
caagaagaagcccttcttaataccttgcaggccaagcttcaggggctagagttgctcgat
gtagaggccgagacccaactcaagcaacagctcgaggccaataccaaacaactgacagat
aaccgcgccatcgttagccaattagaggatcaattaacatggatcactgaggttgaacag
cttacagagcaagtggtgacgcttaacgccgatgtggcggtatccatacaagcaaaaaca
gcctttgaagaggatgcaaaacgtctagagcgtgccaataaggcgttagagattgaaagt
cactatacacaagtgcgtaatctgcgcgcctcaaaacatcagctggatcaagagctgtct
aataaacagcagcaaatccctgtcttacagcagcagcttgatgagcagcaaacacaaatg
actcaggcacaaaagcgtgaagcatcagctaaccaagtcttgaatgacacgctccctgtg
attgaacaaacgcgccagctagataatcaaattgaacaaaagcagcttaccctaaagcag
cagcaacaattacagcacacccatcagcaaagcttggccgaattcaaggcaacaataaca
cgccttatatcagataaaagccaaacccagcagcagctggctgaggttgacagctaccta
cagcagtaccagcaccacagccagctaaatgtggatataagtggcttaaataccctcggc
ttaactcttaaagctgagcttgaaaataactataagctgtatcagcagcagcacttaaaa
gagcaagaaaataaggatctgacccaacaattaaacgccctaaagcaagaacaggccacg
aaccaggccctttatgaaacaaaacaagccaagttgactgagttatatcacgcgcagcaa
gcactgttacagggtcagcctttggcggcacttcgtcagcagcaagagcacaatgatgcc
ttgagcacgcagctgtccatactacagcagcaccttgataataaagctgaattggccact
caaatcagcgctgaaaaggcagtcaccactcagtttgactcagatatggctgacctacaa
agcgccattgaacaggctgagcaagatcttgagatgctaaaccgtcatcagcaggacaaa
caatctcaagtagaacaacaacaaaaaatcattgagctggaggccaagcttgaggattat
atcgagctgttagcccataatcagccctgtccactgtgtggctctaccgaacaccctagt
gttgctaacaaaaaatctaattcatctgaggctcataccaagctccatcaattaaaagat
gagctgtctcaaatagtcgctaaaattaatcgtgccaagcaaaatttggacgacgccaag
ctggcttataaaaacactgagtataagcagcaacaaagccacgctcagctgacaaaccag
ctacagcgacttaatacaacactaagccagatactaaaccatactaatacgttatctgag
caattaagtgctgcccccaccgtgctgcaacagcagttactaaatagcagcgctcacctt
catgaaactgatcctcaaagcagcgatccaaaaaatcatcagaacgaccagcagccagcg
gcgcctaagccggctctattgttaaagctatcgcagctaacagcagattttgacagtcag
ccaaaccagcagcagcttgaggctttactagccacgggcaagcaaattacagcgtgtatt
tatgacgcacagcagcgattacaccatcaaaaacagcagattaagcagtctttagaggaa
caagatgcgctgacccagcagataacagatatcgagaagcggcataaagcgatagaggct
gataaccaaaggctaatgatgcacatcaaggacattgaagccaagcagcagcttaaccag
catagtatcactcaagctacagcctttatagatcaaggttttagtaagcttggtgagagc
gttcaacagctgcaaggtttgctagataagtataaagacagtgcggcgattaatgacgcc
tcacagacccttactgattgcgagcagtcactggctcagcttagacactgtatgaataac
cagcaacacttagatgacaagcagtgctatgactcattacagccgctacgcaatcttagt
caatggatgggcgcgctcaataacagctatgcagccaagctggcctccaagcagcagctc
ttcactgagatccaaacattagacacacagcttaaaagcaatcaggctcaggcagacaaa
gagcacagccagcttgcgctattgagtgacaccatccgtcagctgtcacatgagatgact
cagctgcaaagccgccgccgtgatttatttggtgataagcaagtcaatagcgaagacagc
agattgcgtgccgcgcttgatagtgccaaagaccagcttaatcaaataattaaagagcac
agccatacgcagcatcaattaagcacgcttcaagcagaaagcctacgccttgagactcag
ctgtctgaattacaaagtcaacttgctcagcaagagcacgcgctaggcacacagcttctt
gcccatgattttgattctgaggccgattatttggccgctcgcctgcccaaagaacagcgt
gatgcgctcaatcaacgacagcaagagattgttaatgccctaaattatgcccaaaatgct
ttaaaaacggttgaacatcagctacagcataaaacggctaatccgcaaaccacagacacc
aaagaaaatctacaggctcagcggcaacagcaacaagacttagtcgatgagcttatcgaa
caggtgggcggcatcaatcagcagctacaaaccaatgaggcgcgaaaaacagatcagcgc
tcccaacttgagaagatagctgagcaaaaacaaaagcttaaagtctggcaagagctctat
ggcttaattggctctgccgatggtaaaaaataccgcaccttcgctcaagggctcaccttt
gagattatggtcagcaacgccaatactcagctgcgcaaaatgagtgaccgatacatactg
gtacgtgacgagaacagtccacttgagcttaacgttattgatgactatcaaggcggattg
atacgcagcaccaaaaacttatcgggcggcgaaggcttcttaatcagtctggctttggca
ctggggttatcgagtatggccagccaaaacattcgggtcgactcgctgttcttggatgaa
ggctttggtacacttgatgaggactcgctggatgtggcgctcaacacgctgaccaacttg
cagcaagaaggcaagctgattgggattatctcgcatgtgcaagcgcttaaagatagaatt
cacacccaaattagagtggataaactctcaggcggatatagtaaactcagcggtcctggc
tgttcggcggttaaggattaa
DBGET
integrated database retrieval system
