Psychrobacter sp. YP14: DLE54_05475
Help
Entry
DLE54_05475 CDS
T05488
Name
(GenBank) exonuclease sbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
psyy
Psychrobacter sp. YP14
Brite
KEGG Orthology (KO) [BR:
psyy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psyy03400
]
DLE54_05475
DNA repair and recombination proteins [BR:
psyy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DLE54_05475
Archaeal homologous recombinant proteins
DLE54_05475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
CobU
Metallophos_2
Lmo2446_N_CBM-like
FakA-like_C
Motif
Other DBs
NCBI-ProteinID:
AWT49035
LinkDB
All DBs
Position
complement(1297037..1298632)
Genome browser
AA seq
531 aa
AA seq
DB search
MSNPTSLSHPPKPLTILHTSDWHLGRRLYGQLRYHEFEAFLAWLTQTLQQYEVDVLIVAG
DVFDTMTPSNKAQALYYEFLGVVSKSHCDHVVVVAGNHDSPTLLDAPANVLKALNVHVIG
TACEDVADEVLVLTDSQDQAQCIIAAVPYLRDRDVRSAQAGESGADKDANLLAGIHEHYA
KVAQVAKAKQAKLIAQQQRHIPLIATGHLFAAGGATTADDGVRELYVGSLGKISADMFDE
CFDYVALGHLHVPQKVGGREHIRYSGSPIAMGFGEANQTKQVLLVQFGQNLASDSLKERV
QEHIKERIEEASTAPQISAKPSHTLTTPAAGVAANLSQADLFCGDLFDDWLEPTANQPSQ
LQTHADSAADSISQLDKQHKPDEALAAKTLHITADNTMQIIAITVPCFQQLLPISGDINH
ILQSLQQLPHTKPIWIEVAYTGDEIVSDLREQIHAAVAGTPFEVLKIKNHQVRNKVLKAQ
STHETLQDLDEMQVFERCLVANKVAESQRPSLREAYAQIVYQIHHDDSMAE
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatcctacttcgttatcccatcccccaaaaccactcaccattttacatacctca
gactggcatctgggacgccgtttgtatggccaattacgctaccatgaatttgaggctttt
ttggcatggctgactcagaccttgcagcaatatgaggtcgatgtgctgatcgtcgctggt
gatgtatttgacaccatgacgcccagtaataaggctcaagcgctgtactatgaattcttg
ggtgtggtctctaagtcgcactgcgatcacgtggtggtggtggctggcaatcatgactcc
cctaccctcttggacgcgccagccaatgtgctcaaagcgttaaacgtgcatgtgattggc
accgcttgcgaagatgtggccgatgaagtattggtgctcacagacagccaagatcaagcg
caatgcatcattgcggcggtgccttatcttcgtgaccgtgatgtgcgtagtgctcaagca
ggcgagtcaggcgcagataaagatgccaatctgttggctggtatccatgagcactatgcg
aaggtggcgcaggttgccaaagccaaacaggccaagctgatcgctcagcagcagcgccat
atccctcttattgccactggtcatttgtttgccgcagggggtgcgaccacagctgatgat
ggggtacgtgagctgtatgtcggcagtctgggtaagatttcagccgatatgtttgatgag
tgctttgattatgtggcacttgggcacctgcatgtgccgcaaaaggtgggcggccgtgag
cacattcgttatagtggctcccctattgcgatgggctttggagaggccaatcagaccaaa
caggtattgttggtacagtttggccaaaacttagcctctgatagccttaaagagcgcgtt
caagagcacattaaagagcgcattgaggaggcttctactgcacctcaaatatctgctaag
cccagccataccttaacgacaccggcagcaggcgtagctgccaatttatctcaagcggat
ttgttttgtggagatttatttgacgattggcttgagccgacagcaaatcagccatctcag
ctgcaaacccatgcagattcagcagcagactctataagccaattagacaagcagcataag
ccagatgaggcactggcggccaaaaccttgcacatcaccgccgataataccatgcaaatt
atcgcgattactgtgccttgctttcagcagctcttgcccatttcaggtgatatcaatcat
attctacaaagcctgcaacaactcccacacaccaagcccatttggatagaggtggcttat
accggcgatgaaatcgtcagcgatttgcgcgagcagatccatgctgccgtggctggcaca
ccttttgaggtattaaaaatcaagaaccatcaggttcgtaacaaggtgctcaaagcacag
agcacgcatgagacgctgcaagacttggatgaaatgcaggtctttgagcgctgcttagtg
gcgaataaagtggcagaatctcagcgtcccagcttgcgcgaggcctatgcacaaatcgtg
tatcaaatccatcatgatgactcgatggccgagtag
DBGET
integrated database retrieval system
