Psychrobacter sp. YP14: DLE54_06015
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Entry
DLE54_06015 CDS
T05488
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
psyy
Psychrobacter sp. YP14
Pathway
psyy03030
DNA replication
psyy03430
Mismatch repair
psyy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psyy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DLE54_06015
03430 Mismatch repair
DLE54_06015
03440 Homologous recombination
DLE54_06015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psyy03032
]
DLE54_06015
03400 DNA repair and recombination proteins [BR:
psyy03400
]
DLE54_06015
Enzymes [BR:
psyy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DLE54_06015
DNA replication proteins [BR:
psyy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DLE54_06015
DNA repair and recombination proteins [BR:
psyy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DLE54_06015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HHH_3
Motif
Other DBs
NCBI-ProteinID:
AWT49122
LinkDB
All DBs
Position
1440115..1443726
Genome browser
AA seq
1203 aa
AA seq
DB search
MAFVHLGIHSEFSITDSIIRIKPMVKAAAADGQMALALTDLSNLYATVKFYRACLDAAIK
PIIGAEIILDDEHTRLTLLAMNNEGYQSITRIVSLGFTDGRMNPDNRGTPIVNKAHLLDN
SAGVIVLFTEKSDVGQALLGANPERGHQLISEYQAVFGDRLYFAIKRTKRALEDTFIEQA
ILAGQRHGIATVAHNDVRFLEEEDFDAHEARVCIASSHVLADPNRPHDYSSEQYLKTQAQ
MTELFSDIPQVVQNTVILAQRCNVTLTLGINVLPEFPVPEGETIESFFRAESQRGLEARL
DKLYPVSERDETWPEIRRPYDERLNHELNIILEMGFPGYFLIVMDFIRWAKANGVPVGPG
RGSGAGSLVAYALNITDLDPLHYDLLFERFLNPERVSMPDFDIDFCIEGRDRVIEYVASQ
YGREAVSQIITFGTMAAKAVVRDVARVQSKSYGLADKISKLIPKTPGISLKDALLEEPQL
KDLLSNPDNMDYEDANEIWEMAIKLEGITRNVGKHAGGVLIAPNKITDFSAIYCDEEGHR
VSQYDKDDVEAVGLVKFDFLGLRNLTVINAAVKNINERRARENKPALELEDLPLDDTNAY
KLLQDAKTTAVFQLESSGMKKYLAKLQPTNIEDVIAMCALYRPGPLDAGMVEMYIDRKHG
REEVVYDHPNLEPILENTNGVIVYQEQVMQISQVMAGYSLGGADMLRRAMGKKKPEEMAK
QRDIFVTGATAQGIDPVISGGVFDLMEKFAGYGFNKSHSAAYGVLAYQTAYLKYYYPAEF
MAAVLTSDMNNTDNVVFFINDCRENFDLSVDNPSVNRSEWHFVADTPTNIIYGLGAIKGV
GEGAVDSIVQARRQGGKFTDLYDFCRRVDIKKVNKRTLEALIKSGCFDDFAITQRPDLAA
DERHQIRGALMAQLPSAVQAAEQERQNNEMGMMDLFSEVDNATTAPPLPTDSGLIWGDKH
RLKAEKDTLGLYLTGHPLDQYRKEVAVYTSNARLDSLADTGYNGSTFFAGLIMDIANFGN
RCVITLDDGTARLEVSCYAERFNRIKDKLKVDEVIVIKGGIRDRDGRLFARLDNAYTLLE
CRQRWVKKISIKIHSQNTLLLDSLQPLLKPAQSHLIPNHQSPAFDEDSDDGNSMEAYYNG
NSDMTAAPVAQNDGCIPIALNIYTDFAIANVSLNDNWRLYPTDDNLIQLGTLVPQDNLYF
HYQ
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttgtacatcttggtattcacagcgaattttctattacggactctattatccgt
atcaaacctatggtcaaggcggccgctgctgatggacagatggcactggcattgacagat
ttatcgaatttgtatgccactgttaaattctatcgtgcctgcctagatgcggcgataaag
cccattattggtgctgagattattcttgatgatgaacatactcgtttaaccctgcttgcc
atgaataacgagggttatcaaagcattacccgtattgtctcgctaggcttcactgatggc
cgcatgaatcctgataaccgaggaacacctattgtcaataaagcgcatttgctagataac
agcgcaggggttattgtactattcaccgaaaagtctgatgtgggtcaagcattattaggc
gcaaacccagagcgtggacatcaattaattagcgagtatcaagcagtatttggtgatcgc
ctgtattttgcgataaagcgcaccaaacgggctttggaagatacttttattgaacaggcc
atattggcaggtcagcgtcatggtattgccacagtggcccataatgacgtgcgctttttg
gaagaagaggactttgatgctcacgaagctcgagtgtgtattgcctcctcccatgtattg
gctgatcccaataggccacacgactactcaagtgaacagtatctaaagactcaagcccag
atgactgagctattttccgatatccctcaggtggttcaaaacacggtcattctagcgcag
cgctgtaacgttactttgacactgggcataaacgtattgcctgaatttccagtaccagaa
ggtgagaccattgagtctttcttcagagctgagtcgcagcgcgggctggaggcacgtttg
gataagttatatccagtaagcgagcgtgatgagacgtggcctgagattcgcagaccctat
gatgagcgcttaaaccatgagcttaatattatcttggagatgggatttccgggctacttc
ttaatcgttatggactttattcgctgggccaaagccaatggcgtacctgtcggcccaggg
cgtggttcgggcgccggctcgttagtggcctacgccttgaacatcaccgaccttgatccg
ctgcattatgatctgctgtttgagcgcttcttaaaccccgagcgtgtgtccatgcctgac
ttcgatatcgacttttgtattgaagggcgtgaccgcgtcattgaatacgtggccagtcag
tatggccgtgaagcggtatcgcagattatcacctttggtaccatggcggctaaagctgtg
gtgcgagatgtggctcgtgtccaaagtaaatcttatggcttggctgataaaatctccaag
cttattccaaagacgcccggtatctctttaaaagacgccctactcgaggagcctcagctt
aaggatttgctgtctaatccggacaacatggactatgaagatgccaatgaaatctgggag
atggctattaagcttgagggcatcactcgtaacgtcggtaagcatgccggtggggtacta
atcgccccgaacaaaatcaccgactttagtgcgatttattgtgatgaagagggtcaccgt
gtcagccagtacgataaagatgatgttgaggccgttggtctggttaagttcgacttctta
ggtctacgcaacctaacggttatcaatgccgctgtcaaaaacatcaacgagcgccgtgcc
cgcgaaaacaaacccgctttagagcttgaagacttaccgcttgatgatacaaatgcctat
aagctgctacaagacgccaaaaccacagcggtattccagctagagagctcggggatgaaa
aaatacctggctaagctgcaaccgaccaacatcgaagacgttatcgccatgtgtgcgttg
tatcgccccggcccattagacgctggcatggtagagatgtatattgaccgcaaacatggg
cgtgaagaggtggtgtatgatcacccaaaccttgaacccattttagaaaacaccaatggg
gttattgtctaccaagagcaggtaatgcaaatctcacaggtcatggctggctatagctta
ggcggcgctgacatgctgcgccgtgccatgggtaaaaagaaacctgaagagatggccaaa
cagcgtgacatttttgtgaccggtgccacagcacaaggtattgaccctgtcatctctggc
ggtgtgtttgatttgatggaaaaattcgccggttacggctttaacaagtcgcactcagcc
gcttacggggtacttgcctatcaaacggcttatctcaaatattattacccagctgagttt
atggcagcagtccttacctcagatatgaacaacaccgataacgtggtgttcttcattaac
gattgccgtgaaaacttcgatcttagcgtcgataacccctcagtaaatcgaagtgaatgg
cactttgtggccgatactcccaccaacatcatctatggtttaggtgccattaaaggcgtc
ggtgaaggtgcggtagattctatcgtgcaagcacgtcgtcaagggggcaagtttacagat
ctttatgatttttgccgccgagtagatatcaaaaaggtaaacaagcgcaccttagaggcg
ttaattaaatctggctgctttgatgactttgccattacccagcgcccagatttagcagca
gatgagcgccatcagattcgcggtgcgttaatggcacagctgccaagtgcagtacaagcg
gcggaacaagagcgtcaaaataacgaaatgggcatgatggacttattcagtgaagtcgat
aatgccaccaccgcaccgccactgcctacagatagcggtctgatttggggagacaagcac
cgtctcaaagctgaaaaagacaccctagggctttatttaaccggtcatcccctagatcaa
taccgcaaagaggtggctgtttatacctcaaatgcccgtttagatagcttggcagatact
ggctataacggcagtactttttttgccggtttgattatggacatcgcaaactttggtaac
cgctgcgtcattacacttgatgatggcacagcccgtcttgaggttagctgctatgctgag
cgttttaaccgcattaaagacaagctcaaggtcgatgaggtaattgttatcaaaggcggt
attcgagaccgtgatggccggttattcgcccgtttagacaatgcttataccctgcttgaa
tgccgtcaacgttgggtaaaaaagataagtatcaagattcacagccaaaacaccttgttg
cttgactcactacaacccttactaaagcctgctcagagtcatctcattccaaatcatcaa
agccccgccttcgatgaagacagtgatgacggcaattcaatggaagcttactataacggc
aactcggatatgacagcggctccggtagcacaaaacgatggctgtattcctatcgctcta
aacatttataccgactttgccattgccaatgtcagtttaaatgacaactggcgtctgtac
cccacagatgacaatttaatacagctgggcaccttagtaccccaggacaacttgtatttc
cattaccagtag
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