Psychrobacter sp. YP14: DLE54_06390
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Entry
DLE54_06390 CDS
T05488
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
psyy
Psychrobacter sp. YP14
Pathway
psyy03030
DNA replication
psyy03430
Mismatch repair
psyy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psyy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DLE54_06390
03430 Mismatch repair
DLE54_06390
03440 Homologous recombination
DLE54_06390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psyy03032
]
DLE54_06390
03400 DNA repair and recombination proteins [BR:
psyy03400
]
DLE54_06390
Enzymes [BR:
psyy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DLE54_06390
DNA replication proteins [BR:
psyy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DLE54_06390
DNA repair and recombination proteins [BR:
psyy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DLE54_06390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
HolB_lid
MAGI_u5
WDR90_beta-prop_4th
UTRA
Motif
Other DBs
NCBI-ProteinID:
AWT49186
LinkDB
All DBs
Position
complement(1538841..1539965)
Genome browser
AA seq
374 aa
AA seq
DB search
MSTEQPVYFAPVLPWQQTAWDNLIARYERLPHGLLFAGMQGIGKRAFVWRFVAWLLCDNR
EQPSSQQGACGQCQSCQWLASGTHPDLQVLPISSLPSLEVEAATATKGGKSNTKKASENG
AAKASVKPSIKIDDIRELQPFISQGSSGRRVCVIDYADKMTVAAANALLKTLEEPREGIH
LLLISDMPTKLLPTIRSRVQQVAMDPMAYEQVFAYLENHVSQHTQNPAQSDNAAPLSEQV
AQALKLSNGAPLAALEMLSSAWYQQRGTWVKVWLALRAGKRSAIAASDYWQKQLSLDDFI
KLSEFMLMDFSRQCLGMPTLQQDLALAQYQSITELQLESIQALMTVIEDVKIACQQNVND
KMAYDQLLAALALL
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgagcactgagcagccggtctattttgccccagtattaccttggcagcaaactgcttgg
gacaacttgatagcacgctatgagcgtctaccgcatggcttgttatttgctgggatgcag
gggattggtaaacgtgcttttgtatggcgctttgtggcttggctactttgtgataatcgt
gagcagccaagctctcagcaaggcgcatgtggtcagtgtcaaagctgtcaatggctcgcc
tctgggacgcatcctgatttgcaggtgttgcccatcagcagtttgccaagtttagaggtg
gaggccgcaactgcaaccaaaggcggtaaatccaataccaaaaaagcgtctgagaatggg
gcggctaaagcttctgtaaagccgtctataaagattgatgacattcgagagctgcagcct
tttattagccagggcagtagtggacgccgggtttgcgttattgattatgccgataagatg
acagtggctgcagccaatgcgctgcttaaaaccttagaggagccgcgtgagggcattcat
ttgctgctgattagcgatatgcctaccaaattattgcccaccatcagaagccgggtgcag
caagtggcgatggatcctatggcgtatgaacaggtttttgcttatttagagaatcatgtc
tcacaacacactcaaaaccccgctcaatcggataatgcggcacctttatctgagcaagtg
gcccaagcattgaagctgtctaatggcgcgccgctggctgccttagagatgctaagcagt
gcttggtaccagcagcgtggtacttgggttaaggtttggctggcactcagagccggcaag
cgcagcgccatagcggccagtgattattggcaaaagcagctgtctttggatgactttatt
aaactatcagaatttatgctgatggattttagccgtcaatgcttagggatgcccaccttg
cagcaagatttggcattggcgcaatatcaatctattactgagcttcagcttgagtccatc
caagcgttaatgactgtgattgaggatgtgaaaatagcgtgtcagcaaaacgtcaacgat
aaaatggcttatgatcaattattggcagcgttagccttgttataa
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