Psychrobacter sp. YP14: DLE54_07185
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Entry
DLE54_07185 CDS
T05488
Name
(GenBank) helicase
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
psyy
Psychrobacter sp. YP14
Brite
KEGG Orthology (KO) [BR:
psyy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psyy03032
]
DLE54_07185
03029 Mitochondrial biogenesis [BR:
psyy03029
]
DLE54_07185
Enzymes [BR:
psyy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
DLE54_07185
DNA replication proteins [BR:
psyy03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
DLE54_07185
Mitochondrial biogenesis [BR:
psyy03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
DLE54_07185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_19
AAA_30
HTH_40
AAA_22
Pif1_2B_dom
SH3_13
AAA_5
DEAD
Herpes_Helicase
Viral_helicase1
nSTAND3
AAA_16
AAA
T2SSE
AAA_24
AAA_7
PhoH
AAA_14
UvrD-helicase
UvrD_C_2
nSTAND_NTPase5
Microtub_bd
HTH_5
Sigma54_activ_2
HTH_24
Nha1_C
Motif
Other DBs
NCBI-ProteinID:
AWT49312
LinkDB
All DBs
Position
complement(1737437..1739416)
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AA seq
659 aa
AA seq
DB search
MKQATALDILKTGKNVFLTGSAGSGKTYTLNEYIHYLRARRVPVATTASTGIAATHMNGI
TIHSWSGIGIKDELTERDLVNLSRKKVLKDRLQETAVLIIDEISMLHAKQLNLVNQVLKH
MRQNDKPFGGIQVVVAGDFFQLPPVGSRGESNRDKFAFMSQAWLDAGFKICYLSEQHRQQ
SGEGEDAQITLDNILNQIRGENGVSAAAIAALQNTFYQDVDVNRTRLYTHNVNVNKINEH
ELALLEGETVTYNAIAHGDNKLVETLKKSVRTSDELTLKTGAKVMFIKNNSELGVSNGTM
GELIGFTTIKPLKSSIATIDDGSADEDGSAEALDEALETLEDAEALAHNESDKPLVSTDR
YPIVRLNSGRQVIAEGEEWIVEDESGEILASYTQIPLTLAWAITIHKSQGMTLDAAEIDL
SKTFELGQGYVALSRLKSLEGLKLLGMNDLSLRLDPLARGADSRFKDLSLEAQQAFEDIE
REVLQESHERFVIASGGTLNKANIAAFEKEYKNRKKKQAQKLAQKDKLSNQLSDHSESTL
MATRILLEESLSIAEIAQSRGLAQSTIMGHVARLRRQDPSLNCDHLRPDEAILNKVSKAV
DAIVAAGDPNDFNAADDSTQSVKGGDDFDKQRIKLRPIYEYLKQQIDYNTIRLALVFID
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaagcgaccgcactggatattttaaaaacgggcaagaatgtatttttgaccggc
tctgcaggctcaggaaagacctatacgctaaatgagtatatccattatctacgggcgcgc
cgtgtgccagtagccaccacagccagtaccggcattgctgcgacccatatgaacggtatc
accatccatagttggtcagggattggcatcaaagatgagctaactgagcgtgatttggtg
aatttatctcgcaaaaaagtgctcaaagacaggctgcaagaaacagcggtactgattatt
gatgaaatctctatgctgcatgctaagcagttgaacttggtcaaccaagtcctaaagcac
atgcgccaaaacgataagccctttgggggaattcaggtggtggtggccggtgactttttt
cagctgccgcctgtgggcagccgaggtgagagtaaccgcgataagtttgcatttatgtcg
caagcttggctggatgccggctttaagatttgttatctgagcgaacagcatcgtcaacaa
agcggtgaaggagaagatgctcaaatcacactggataatattctcaatcaaattcgaggt
gaaaacggggtatccgctgcggccattgcagccttgcaaaacaccttttaccaagatgtc
gatgtcaatcgtactcggctatatactcataacgtcaacgttaataaaatcaatgagcat
gagctggcattgttagagggcgaaaccgtcacctataatgccattgctcatggtgataat
aaactggtagaaaccctaaagaaatcagtgcgtaccagtgatgagctgaccctaaagacg
ggtgctaaagtgatgttcatcaaaaataatagcgagcttggggtgtcaaacggcaccatg
ggcgaattgattggatttaccaccatcaaaccgctcaagtcgagcatagcgaccattgat
gatggcagcgcagatgaggatggctcggcagaagccctagatgaggctctagaaacgtta
gaggatgctgaggcattggcgcacaatgaatctgataagcccttagtctctactgatcgc
tatcctattgtccgacttaatagtggccggcaggtgatcgctgagggcgaggagtggata
gttgaagatgagagcggcgagattttagccagttatactcaaatccccctgacgctggct
tgggccattaccattcataaatcacaaggcatgacactagatgctgccgaaatcgattta
tccaagacttttgagctgggtcaaggctatgtggccttatctcgcttaaaatcgcttgag
ggtctaaagctattgggtatgaatgatttaagtttacgcttagaccccttagcacgtggg
gcggattcacgctttaaggatctgtctttagaggcgcagcaagcctttgaagatatcgag
cgtgaggtactacaagagtcgcatgaaagatttgtgattgcctcaggcggcacgttaaat
aaggccaatattgccgcctttgaaaaagagtataaaaaccgcaaaaaaaagcaggcgcaa
aagctggctcaaaaagataagctaagcaatcaattaagcgatcactctgagagtacctta
atggccactcgtatcttgctagaggagagcttaagcattgctgagattgctcaaagtcga
gggctggctcagtcgaccattatggggcatgtggcgcgtcttcgacgccaagatccaagc
ttaaactgtgatcatttgcgcccagatgaggcaatcttaaataaagtcagtaaagcggtg
gatgccattgttgctgctggcgatcctaatgattttaatgcggctgatgacagcactcaa
agcgtgaagggcggggatgactttgataaacagcgtatcaaactgcgtcctatctatgag
tatttaaaacagcaaatagattataataccatccgcttagcgcttgtctttattgattga
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