Psychrobacter sp. YP14: DLE54_07300
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Entry
DLE54_07300 CDS
T05488
Name
(GenBank) lytic transglycosylase
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
psyy
Psychrobacter sp. YP14
Brite
KEGG Orthology (KO) [BR:
psyy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psyy01011
]
DLE54_07300
Enzymes [BR:
psyy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
DLE54_07300
Peptidoglycan biosynthesis and degradation proteins [BR:
psyy01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
DLE54_07300
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GFIT
Motif
Pfam:
SLT
SBP_bac_3
NMT1
ABC2_membrane_3
Motif
Other DBs
NCBI-ProteinID:
AWT49334
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Position
1771155..1772387
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AA seq
410 aa
AA seq
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MQRIADRLKRKDKSHSNPVVSHLPSQSFKRVNRFVPTLFYTAFGTKKPLASKKFAKTKML
VQISSIALLSLPAKSLTTSLFSTDSVAYDKVMASNTLTLASVKGDSTYFATDGFQHGFGY
DIARSYANQLGVTLQVQDYANEAQALQAVRQGKADMALTTASTKLTEDTGLSAINISCGF
DTTLATNGLHPKTNWAFRSGNDPLAIKASDFLCENGQLINTAKIANFYDQTLLKDDYNRE
HFEQALTANLPHYKTSFQQQADTYDHDWQLLVAMGYQESHLDANATSPTGVRGLMMLTNN
TAKAMGVSDRIDPYQSIGGGARYLEQMKAEFRDVPNPDRLWFALASYNMGPNAVKSIQSK
VAKAGQDPKSWTNVYAYMSDHAASNSRYTQCMHYVTNIRSYLESLKMRTA
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgcatcgccgataggttaaaacgcaaagacaaatcccattcaaatccagttgta
tcacacctaccctctcaaagcttcaaacgcgttaaccgctttgtacctaccctgttttat
accgctttcggtactaaaaaaccccttgcgagcaagaagtttgcaaagaccaagatgctg
gtgcaaatctccagtattgcgctactgtctttgccggccaaaagtttaaccacctcctta
tttagcacagattctgtagcatacgataaggttatggcgtcaaatactctcaccttagcc
tcagtcaaaggtgatagcacttattttgcgacagatggctttcagcatggctttggctat
gacattgcgcgcagttatgccaatcaattaggggtgacgctgcaggtgcaagactacgcc
aatgaagcacaagcactgcaagctgtgcgtcaaggcaaagcagatatggcgctgacgaca
gccagtacaaagctaaccgaagataccggacttagcgccattaacatcagttgcggcttt
gacaccactttggccactaatgggctacatcctaagaccaattgggcttttcgtagtggc
aacgacccgcttgccattaaagccagtgattttttgtgcgaaaatggccagttaatcaac
accgccaaaattgccaatttttatgatcagacgttattaaaagacgattacaatcgcgag
cactttgagcaagcgctcactgccaatttgcctcattataagacctccttccagcagcaa
gccgacacttatgaccatgattggcagctgcttgtcgccatgggctatcaagagtcgcat
ctggatgctaatgccacctcacccacaggggtacgcgggcttatgatgctgaccaataac
accgccaaagccatgggcgtctctgaccgcatcgacccctatcaaagcatcggcggtggt
gcacgctacttagaacaaatgaaggccgaatttagggatgtgccaaacccagatagactg
tggttcgccctcgcctcttacaacatgggtcccaatgcggttaagagcatccaaagcaaa
gtggctaaggccggacaagaccccaaaagctggaccaatgtgtatgcttatatgtccgac
catgccgcaagcaactcacgctatacccagtgcatgcactatgtgaccaacattcgcagc
tacttagagtcactaaaaatgcgcaccgcttaa
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