Psychrobacter sp. YP14: DLE54_07340
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Entry
DLE54_07340 CDS
T05488
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
psyy
Psychrobacter sp. YP14
Pathway
psyy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psyy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DLE54_07340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psyy03400
]
DLE54_07340
Enzymes [BR:
psyy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
DLE54_07340
DNA repair and recombination proteins [BR:
psyy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DLE54_07340
Prokaryotic type
DLE54_07340
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
TelK_muzzle
Motif
Other DBs
NCBI-ProteinID:
AWT49341
LinkDB
All DBs
Position
complement(1782342..1783082)
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AA seq
246 aa
AA seq
DB search
MSLVNEPKGQKSAAEKQAILAKVKMPEDWKQALADELTSDNMDNLRDFLRQEYGSGKSIY
PKASQMFNAFNLTPLSQVKVVILGQDPYHGPGQAMGLSFSVPKMIPMPPSLRNIVKEMAD
DIGTVPPKHGDLTSWAEQGVLLLNASLTVEEGMAGSHQGKGWEQFTDAVIDVVNQQTNNT
VFILWGSKAKLKGKFVDTDKHLVLSAVHPSPLAANRGGFFGSKPFSKTNDYLQQHGKTPI
DWQLPQ
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgtcattagtgaatgagcccaaaggccaaaaaagtgcagccgagaagcaggccatttta
gccaaagttaagatgccagaggactggaaacaggccttagcagatgagttgacctcggat
aatatggacaatctgcgtgactttttacgtcaagagtatggctctggcaaaagtatatat
cccaaagccagccaaatgtttaatgcctttaatttaaccccgctatcgcaagttaaggta
gtgatattaggtcaagatccttaccatggcccaggtcaggcaatggggctgtctttttcg
gtgcctaagatgattccgatgccgccctccttacgtaatattgtaaaagaaatggccgat
gatattggtacagtcccgcccaagcatggggatttaacctcatgggctgagcagggcgtt
ttactactaaatgcctcgttgaccgtagaagagggcatggcaggcagtcatcagggtaaa
ggttgggagcagtttaccgatgcggtcattgatgtggtcaatcagcagaccaataatacg
gtctttatcttgtggggcagcaaagccaaacttaaaggaaagttcgttgacactgataag
catttggtgctctctgcggtgcacccttcacctttagcggccaatagaggtggttttttt
ggcagcaagcctttttcaaaaaccaatgattatttgcagcagcatggcaagactcccatt
gattggcaattaccgcaataa
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