Psychrobacter sp. YP14: DLE54_07485
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Entry
DLE54_07485 CDS
T05488
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
psyy
Psychrobacter sp. YP14
Pathway
psyy00550
Peptidoglycan biosynthesis
psyy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psyy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DLE54_07485 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
psyy01003
]
DLE54_07485 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psyy01011
]
DLE54_07485 (mrcB)
Enzymes [BR:
psyy01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
DLE54_07485 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
DLE54_07485 (mrcB)
Glycosyltransferases [BR:
psyy01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
DLE54_07485 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
psyy01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
DLE54_07485 (mrcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
Transpeptidase
UB2H
YjdP
Motif
Other DBs
NCBI-ProteinID:
AWT49365
LinkDB
All DBs
Position
1827692..1830337
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AA seq
881 aa
AA seq
DB search
MGIYRLLDGNYIEKKAVFSHYNRVFFYVGKTIVHHKPSRASSHFDQSSAQFSKSSFSEGK
LPNPQQQRGSVIGFFLLIIIIVGMLMLAMYLIKQDRVITAKFEGKRWNLPAKVYSQPLEL
YQGAALTNKNLDAWLEMLNYKSSSNYNNTGTYNKSSGQYVIHTRGFQYSANDVDPEQVIK
IKIQDSKVTSIQSTEPNDTGIVRIEPVTIGGIYPDNNEDRIVLPIDEIPQPLIDALIATE
DRGFYEHKGVSLKGIGRALYNNLKGGSMQGGSTITQQLIKNFYLSSDRTFKRKANEAVMA
LLLEMHYSKDQILQTYLNEINLGQNGNRSINGFGLAAQFYFNKPLKELRIDQQAMLVGLA
KGTSYYNPRRNPERALNRRNTVLANMLETGKIDQATYDDAIAQKLDVVPKPSVGKSRFPD
FLDIVKRELHDNYHPDDLKNEGLRVFSTLDPIAQMSADAAVQKQLSGLRKSSSKTKGLQA
ALVSANPASGELIAAVGSGSEFTGFNRAIDAKRQVGSLLKPFIYMTALQSGKYNLASPVS
DNPVTLTLPDNTTWTPKNYDGRDHGYVPLTTALAKSYNQAAVNTGIEFGVGPFVDQLHRL
GIKEKIPTYPSLFLGSVELSPMDMLGMYQVMAAGGFRTPIISIRSVVDDRGQILQRSGLD
TKRSVPPDVNYLTNYALQEVVRSGTASSLKSLGSDLNLAGKTGTTNDYRDSWFAGYSGNY
VSVVWVGRDDNKPIGLSGGSGALPVWKDFMGRLRLTPVELVQPDSVEWLWLENGTGKLSH
ESCDNARYLPVLSRYLPEEASDCALAIYEQEQARQRQQWFNDQRKALLDQSRQLDSVQEG
MPANTDSSANDNTAAGSAPEQEASEPTNNRDTWYDKALQWF
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgggcatatatcggctattagatggcaattacattgaaaaaaaggcggttttcagtcat
tataatcgggtctttttttatgttggtaaaactatcgtgcatcacaaaccctctcgcgct
tcttctcattttgaccaatcatctgcacaattctccaagtcctcgtttagcgaaggcaaa
cttcccaacccgcagcagcaacgcggctcagtgattggcttttttttactgattatcatc
attgtcggtatgttgatgctggccatgtatttgatcaagcaagaccgcgttattactgcc
aaatttgagggcaaacgctggaacttgccagccaaggtgtactcgcagcctttagagctg
tatcaaggggcagccctcaccaacaagaacttagatgcttggcttgagatgctcaattac
aaatccagctctaattacaacaatactggcacctataacaagtcctccggccagtatgtc
attcatacccgtggctttcagtacagcgccaatgatgttgaccctgagcaagtgattaag
attaaaatccaagactctaaagtcaccagcattcaaagtaccgaacccaatgatactggt
atcgtgcgtattgagccggttaccatcggtggtatttatccagataacaatgaagaccgc
atcgtgttgcctattgatgagattccgcagccgttgattgatgcgcttatcgccaccgaa
gaccgcggcttttatgagcacaaaggcgtgtcgctcaagggtatcggccgagcactgtat
aacaacttaaaaggcggctcgatgcaaggtggctcgaccatcactcagcagctgattaaa
aacttttatctaagctcagatcgcacctttaagcgtaaagccaatgaggcggtgatggcc
ttgctactcgagatgcactacagcaaagaccaaattttacaaacttatttaaatgagatt
aacctaggtcaaaatggcaaccgttctattaacggctttgggttggctgcgcagttttat
tttaataaaccgttaaaagagctgcgtattgatcagcaagccatgctggtgggcttagcc
aaaggcacaagctattacaatccacgccgcaatccagagcgtgccctcaatcgccgcaat
acagtgctggccaatatgcttgaaacgggcaaaattgatcaagccacttatgatgacgcc
attgctcaaaagcttgatgtggtgcctaaaccaagcgtaggcaaaagccgattccccgac
tttttggacatcgtaaagcgtgagctgcatgataattatcatcccgatgatctaaaaaat
gaaggcctacgcgtctttagtaccttagaccctatcgctcagatgtcggctgatgcagcg
gtacaaaagcaattatcaggcttacgaaaaagcagcagcaaaaccaaggggctacaagcg
gccttggtcagtgccaatccagcttcaggtgagctgattgctgctgtgggtagtggtagc
gaatttacaggcttcaaccgagcgatagatgccaaacgtcaagtgggctcactgttaaaa
ccctttatttatatgacagcgctacaaagtggcaagtacaatctggccagccctgtgagc
gacaacccagttacgctaacgttaccagacaacaccacttggaccccaaaaaactacgat
ggccgagaccatggttacgtgcccttaaccacagcgctggccaaatcttataaccaagct
gcggtaaatacgggtatagaatttggtgtgggcccgttcgtcgatcagcttcaccgctta
ggtattaaggagaagataccaacctatccttcgttgtttttaggctcagttgagcttagt
cctatggatatgcttggtatgtatcaggtcatggctgcaggtgggtttcgcacgcccatt
attagtatccgctctgtggttgatgaccgaggtcaaattctgcagcgctcagggctagat
accaagcgcagcgtgccacctgatgtcaactatttaaccaactatgcgctacaagaagtg
gtgcgcagtggaacggcaagctcgctaaaatccttaggcagtgatctaaatctggccggg
aaaacaggcaccaccaacgactaccgcgactcttggtttgccggctatagtggcaactat
gtcagcgtagtatgggtgggtcgtgatgacaataagcccattggtttaagtggtggcagc
ggtgcattacctgtgtggaaggactttatgggtcgtctgcgcttgacccctgtcgagctg
gtgcagccggacagtgtagagtggttatggctagaaaatggcaccggaaaactgtcgcat
gaaagctgtgataatgcccgctacttgcccgtacttagcagatatttgcctgaagaggcc
agtgactgcgcccttgccatctatgagcaagagcaggcacgccaaagacagcagtggttc
aatgatcagcgcaaggctttgctggatcaaagccgtcagctcgatagtgttcaagaaggt
atgcccgccaatactgattcaagcgctaatgataacaccgctgcaggcagtgctcctgag
caagaagcctcagagcctaccaataatcgtgatacttggtatgataaagcgttacaatgg
ttttaa
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