Psychrobacter sp. YP14: DLE54_08820
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Entry
DLE54_08820 CDS
T05488
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
psyy
Psychrobacter sp. YP14
Brite
KEGG Orthology (KO) [BR:
psyy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psyy03016
]
DLE54_08820
Enzymes [BR:
psyy01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
DLE54_08820
Transfer RNA biogenesis [BR:
psyy03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
DLE54_08820
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Fer4_12
HSL_N
Motif
Other DBs
NCBI-ProteinID:
AWT49596
LinkDB
All DBs
Position
2152072..2153544
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AA seq
490 aa
AA seq
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MSATLFDPKSIAVSNPVDTSTQASLAHASQPTGQAKKKVYIATQGCQMNVYDSEKMGNVL
GDSHDMVVTDNIEEADVLLMNTCSIREKAQEKVFSELGRWRKLKEEKPDLVIGVGGCVAS
QEGDNIQKRAPYVDMVFGPQTLHRLPELYDKSTTQRNVKPKDRIGTVDVSFPSIEKFDFL
PEPKVEGYRAFVSIMEGCSKYCSFCVVPYTRGEELSRPLDDVLAEIDSLAEQGVREITLL
GQNVNGYRGEKDDGSICRFAELLHYVAHVDGIERIRYTTSHPLEFTDDIIEAYAKLPQLV
SHLHLPVQSGSNKILAAMKRNHTIDVYINQINKLMAVRPDMHLSSDFIIGFPGETEEDFL
DTLNLAKALDFDHSYSFIYSKRPGTPASELPDDVSLATKKERLAIFQKVIRDSTLKKTEE
MVGKTLRVMVEEIADRYPDQLLGTADNTRSVLFKATEQQKTDLMGKFVTVKITDFVSPHM
VRGELVDILD
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctactttatttgaccccaaatctatcgctgtctcaaatccagttgatacctca
actcaagccagcttggcgcatgccagccagcctacgggacaagccaaaaagaaagtttat
attgccacccaaggctgtcaaatgaacgtttatgattcagaaaaaatgggcaacgttcta
ggcgactcccatgacatggtggttactgataatatcgaagaggccgatgtgttgctcatg
aacacctgctccattcgtgaaaaagcccaagaaaaagtattctctgagcttggccgctgg
cgtaagttaaaagaagaaaaaccagatttggttatcggtgtgggcggctgcgtggcctct
caagaaggtgacaatatccaaaaaagagccccttatgtggatatggtatttggcccacaa
accttacacagattgcctgagctatatgataaatcgacaactcagcgcaatgtcaaaccc
aaagatcgtattggtacggtcgatgtgtcattcccaagtattgaaaaatttgacttcttg
cctgagccaaaagtagaaggctaccgtgcctttgtttctatcatggaaggctgctcaaag
tactgctcattttgcgtcgtgccttatacccgtggtgaggagctgtcacgtcctttagat
gacgtattggctgagattgatagcctcgctgagcaaggcgtgcgcgagatcaccttattg
ggccagaacgtcaatggctatcgcggtgaaaaagacgatggcagcatctgccgctttgct
gagctgctacactatgtggcccacgtggatggtattgaacgtattcgttacaccaccagc
cacccgcttgaattcactgatgacatcattgaagcttatgctaaattgccacaattggta
tcgcacctgcatcttccggtacaaagtggctccaacaaaatcttggcggccatgaaacgc
aatcacaccattgatgtttatatcaatcagattaataagctgatggctgtgcgccctgat
atgcacttatcaagcgactttatcattggcttccctggagagacagaagaggacttctta
gacaccttaaatttagccaaagcgctagattttgatcactcatatagctttatctactca
aaacgtccgggcacaccggcttcagagttaccagacgatgtgagcttggcgaccaaaaag
gagcgtttggccattttccaaaaagtcattcgggattcaacgcttaagaaaaccgaagaa
atggtgggcaaaactctacgagtaatggttgaagagattgccgatcgttatcccgatcaa
ttgctgggtacagcagacaacacacgctcagtactgtttaaagccactgagcagcaaaaa
acagacttgatgggtaaatttgtgacggtcaaaatcactgactttgtaagcccgcatatg
gtacgtggtgagttggtggatatcttagattag
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