Psychrobacter sp. YP14: DLE54_09770
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Entry
DLE54_09770 CDS
T05488
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
psyy
Psychrobacter sp. YP14
Pathway
psyy03030
DNA replication
psyy03410
Base excision repair
psyy03420
Nucleotide excision repair
psyy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psyy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DLE54_09770
03410 Base excision repair
DLE54_09770
03420 Nucleotide excision repair
DLE54_09770
03440 Homologous recombination
DLE54_09770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psyy03032
]
DLE54_09770
03400 DNA repair and recombination proteins [BR:
psyy03400
]
DLE54_09770
Enzymes [BR:
psyy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DLE54_09770
DNA replication proteins [BR:
psyy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DLE54_09770
DNA repair and recombination proteins [BR:
psyy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
DLE54_09770
NER (nucleotide excision repair)
GGR (global genome repair) factors
DLE54_09770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_2
YchF-GTPase_C
HeLo
Motif
Other DBs
NCBI-ProteinID:
AWT49761
LinkDB
All DBs
Position
2389980..2393048
Genome browser
AA seq
1022 aa
AA seq
DB search
MTDKTTKDTNLKTADTTTDTSHAALDPNILPDFEAMPNVAQMPTDHIDKQQPPFVLVDGS
YYLFRTYHALPKTMMTTQGLTTNAIRGTLNALLKVMRRYHPTHMAVCFDTKSPTFRHTMS
EEYKANRPKMDPELAEQIPYIHRLVRALGIPLLRIEGAEADDIIGTLTHRAIEEGHHVVI
STGDKDMMQLVNDCVILEDSFAGKVVDVPAVEEKFGIKPNQIIDLLTLMGDASDGIKGIP
SVGQKTAVKWLNQYQTVDNILANAHNIKGKVGEKLVEFADNIPRDRQLATIVTNLDIGQD
WEDLRINTDSSAFVAELRDLYSELEFKNELASLDHPNHPANSNVHSVADSKADAESQAQV
AKTLQHQKQSSIIEHIKNSNTHDKAWHTILDESAFDNLLNKLQAAPYFAVDTETTSINWR
EAQIVGLSFSVQAHEAYYLPLAHVDYNEPQKKAKNKKEEAEQAKLLANATVDPLIAKQLD
RDTVLAKLKPILENPNIGKIGQHLKYDAHVLSKYGIELNMSPKNWEMDTMLASYVLNAAA
TRHSMDDLARHYLHTQTISFEDVAGKGAKQVTFDKVAINIASDYACEDADITYQLFELFQ
DKLKDDAVNQRLLHELEIPVAQILCQMESEGIMIKRSFLNELSERFDEEIVALEKQAYIE
AGEAFNLGSPKQLGEMLFDKLGVIGGKKTKSGQYSTGEAVLSKIEHPLAEIALEYRSLAK
LKNTYTDALDAVADNDTDRVHTSYHQALTSTGRLSSTDPNLQNIPIRTKTGRLIRQAFIA
PKGRVLLAADYSQIELRLMAHFSGDDNLTRAFNEGLDIHSATAAEVLGKSVDDVTPTERR
NAKAINFGLLYGMSAFGLAKQIQMGRSEAQDYINQYFARYPGVQRYMQETRNSAVDNGYI
ETILGRKLYTPDIQHSNQMVRRGAERAAINAPLQGSAADLIKLAMIAVDKVLPKQNAKML
LQVHDELVFEVDADKVDHIAKLIKNAMQNVLSDTAKQMGWDVDFAVPLLVETGVGDNWDE
AH
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataaaaccactaaagacactaacctcaaaactgccgataccacaaccgacacc
tcccatgcggcattagatcccaatatattgccggatttcgaggccatgcctaatgtggca
cagatgcctacagatcatatcgataaacagcagccaccttttgtgctggtagatggctct
tactatctgtttcgcacttaccatgcgctgcctaagaccatgatgaccactcaaggcctg
actactaatgccattcgcggtacgctcaatgcgctactcaaagtaatgcgccgctatcat
cccacccatatggccgtatgctttgacaccaagtcacccacgtttcgtcacaccatgtca
gaggaatacaaagccaatcggccaaaaatggatcctgagttggccgaacaaatcccttat
attcaccgtttggtacgggcacttggcattccactgctgcgtattgaaggcgctgaggct
gatgacattatcggtaccctgacccaccgcgctattgaagagggtcatcatgtggtcatc
tcaaccggtgataaagacatgatgcagctggtcaacgactgtgtcatattggaggacagc
ttcgccggcaaagtggtcgatgtgccagcggttgaagaaaaatttggtattaaacccaat
caaatcattgatctacttactcttatgggggatgcttctgacggcattaaaggcatccct
agtgtcggtcaaaaaaccgcagttaaatggcttaatcagtaccaaaccgtagacaatatc
cttgctaacgctcacaacatcaaaggcaaagtgggcgaaaagttggtggagtttgcagat
aatattccccgtgatcggcagcttgccaccattgtgaccaacctagatatcggtcaggat
tgggaagacctgcgcattaataccgatagcagcgcttttgtggctgaattgcgagactta
tatagtgagcttgaattcaaaaatgaattggcatcattggatcatcccaatcaccctgcc
aactcaaacgtccatagtgtggctgatagcaaagccgatgctgagtcacaagcacaagtg
gccaaaaccctacaacaccaaaaacagagctctattattgagcatatcaaaaatagcaac
acgcatgacaaagcttggcacaccatccttgatgagtctgcctttgataatttattaaac
aaactacaggcagcgccttactttgctgtcgataccgagaccaccagtatcaactggcgt
gaagcacagatcgtgggcctgtccttttctgtgcaagcgcatgaggcttattatttacca
ctggcacatgtggactataacgaaccgcaaaaaaaggcgaagaacaaaaaagaagaagcc
gagcaagcaaaactacttgcaaatgcaacagttgatccgctaatagccaaacagcttgac
cgtgatacagtgcttgccaaattaaagcctattttagagaaccctaacattggcaaaatc
ggtcaacatctaaaatatgatgctcatgtattgagcaagtatggtatcgagttaaatatg
tcacccaaaaactgggaaatggataccatgctcgcaagctacgtgttaaatgcagcagct
acccgtcacagcatggacgatcttgcccgccattatttgcatacccaaaccattagcttt
gaagacgtcgcgggtaaaggggctaagcaggtgacctttgataaagtcgctattaacatt
gccagtgactatgcgtgtgaagacgccgatattacctatcaattgtttgagctgttccaa
gataagctcaaagatgacgcggtcaaccaacgcctattgcatgagcttgagattcctgtg
gcacagatattgtgtcagatggagtccgaaggcattatgatcaaacgctcattcttaaac
gagttgtctgagcgctttgatgaagagattgttgcgcttgaaaagcaagcctacattgaa
gccggagaagcgtttaacctaggctcacctaagcaattgggtgaaatgctgtttgataag
cttggcgttattggcggtaaaaaaaccaaatccggtcaatactcaaccggtgaggcagta
ttgtcaaagattgagcacccactggctgagattgccctagaatatcgtagcttagctaag
ctcaaaaacacctataccgatgcactcgatgcggtagccgataacgatactgaccgtgtg
cataccagctatcatcaagccttaaccagtaccggtcgcctctcctctactgatccaaac
ttgcagaacattcctattcgcaccaagactggccgcttaattcgccaagcctttatcgca
cctaaaggccgagtgctactggcggcggactactcacagattgagctgcgcttgatggca
catttctcaggtgacgacaacctgactcgcgcctttaatgaaggcttggacattcatagt
gccacagcagctgaggtgcttggtaaatcagtcgatgatgttaccccaaccgagcgccgt
aacgccaaagccattaactttggtttgctctatggtatgagcgcctttggtctggccaag
caaattcaaatgggacgcagtgaagcacaagactatatcaatcagtacttcgcacgttat
cctggcgtgcagcgttatatgcaagagactcgaaatagcgcggtagacaatggctatatc
gaaaccatcttagggcgtaagctttataccccagacattcagcacagcaatcaaatggta
cgccgcggcgccgaacgtgctgcgattaatgccccactacaaggcagtgccgctgattta
attaagcttgcgatgattgcggtggataaagtattgcccaaacaaaatgccaaaatgcta
ttacaggtgcatgatgaattggtatttgaggtggatgccgataaggtcgatcacattgct
aagcttattaaaaatgcgatgcaaaatgtactgagcgataccgctaagcagatgggctgg
gatgttgattttgccgtaccattattggtggaaactggtgtcggtgataactgggatgag
gcgcattag
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