Psychrobacter sp. YP14: DLE54_10200
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Entry
DLE54_10200 CDS
T05488
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
psyy
Psychrobacter sp. YP14
Pathway
psyy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psyy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DLE54_10200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psyy03019
]
DLE54_10200
Enzymes [BR:
psyy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
DLE54_10200
Messenger RNA biogenesis [BR:
psyy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
DLE54_10200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AWT49838
LinkDB
All DBs
Position
complement(2492348..2494498)
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AA seq
716 aa
AA seq
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MAERSAKQLGLSKADLPNSIIEVIATLNKGGFDAYIVGGGVRDTLLGLSPKDFDAVTDAR
PHEVKDLFGKRCRIIGRRFQLAHVYSGRDMIEVATFRAPPTGDAHATSDGMIVRDNVWGD
IEQDFARRDFSINAMYYQPLKGVVHDFCNALDDIKNKTLRLLGHAPLRIEEDPVRLLRAL
RFKAKLGFEFDEELSNQFHDENWALLDQVSPHRLYDESQKMFTGGYLVPLLPLLFEYGAI
RHLIIYPPQAPTRLVNQVAINTDKRIALGKSINPAFFYAALLWENYLHQLAKFKKKNMPF
HDAQLQAASKVIDRQRVKTAIPRFAEQFIRDIWVMQPKLANPRVKQIPQLAEHPRFRAAF
DFLLLREQCDDELNPLSESTNGMGEWWQTYQTLSEKQKQQAIDNFAGDARRGSGKSGRNR
SRNRNRIEEQNPIDAQANTEATNSYKPKVPKHKAALDSTPKDAAQDDRYVEERAQLEKLS
LGNLVSEQSPKHNQPSPLFTINAEKMAKQVPQQPGIEAQAELQATSVQNEVESKAAGRTE
TASKPAKAKNSQKQEPQKQEAKLDQATAKVQSQAVLLPKSEPVPAKRRRRLPSQEMSQSE
QAQAKLATAQPSSTKADVTPAANNAASADAKSAKAKKPANNSNSKAAETLVEVPANSETR
VDSETRKAKPEVAKKRSKPAATLDVNSLIAKSERVPATRRRRQPSSMLSVSETSQS
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggcagaacgttcagccaagcagttagggttaagtaaggcggatttacccaattcgatt
attgaagtgattgccactttaaacaagggtggttttgatgcctatattgtcggtggcggg
gttcgcgatacacttttgggcttaagtccaaaggattttgatgccgtaactgatgccaga
ccgcatgaagtaaaagacttatttggcaaacgttgccgtattatcggtcgccgctttcaa
ttggcgcatgtgtattctggccgtgacatgattgaagtggctacttttcgtgcgccacca
acgggagatgcgcatgccaccagtgatggcatgattgtgcgtgataacgtctggggcgat
atcgagcaagattttgcgcgccgtgatttttctatcaatgccatgtactatcagccttta
aaaggcgtggtacatgatttttgtaatgccttagacgacatcaaaaataagaccctaaga
ttattaggtcatgcgcctttgcgtattgaagaagaccccgttcgtctgctacgtgcccta
cgttttaaagcaaagttgggttttgagtttgatgaagagctgtccaatcagtttcatgat
gaaaattgggcgctgttagatcaagtgtctccgcaccgtctgtatgatgaatcacaaaaa
atgtttaccggcggctatttggtccctttattgcccttattatttgaatatggtgccatt
cgtcatttgattatttatccaccacaagcgcccacgcgattggttaatcaagtggccatt
aataccgataagcgtattgctctgggcaaaagtattaatccagcgttcttctatgccgct
ttgttgtgggagaattatttgcatcaattggctaagtttaaaaagaaaaacatgcctttt
catgatgcacaattgcaagcagcaagtaaggtcattgaccgtcaacgggtaaaaacagcc
attcctcgttttgctgagcaatttattcgtgatatctgggttatgcagcccaagcttgcc
aatcctagagtaaagcagatcccacagttggccgagcaccctcgttttcgcgctgcgttc
gactttttattattgcgtgagcagtgtgatgatgagctcaatcctttatctgagtcgacc
aatggcatgggtgagtggtggcagacttaccagaccctatctgaaaaacaaaagcagcaa
gccattgataactttgcaggtgatgcgcgccgtggcagcggtaagtcaggtcgcaatcgt
agccgtaatagaaatcgcatcgaggagcaaaacccaatagacgcacaagccaatactgag
gccaccaatagctataagccaaaagtgcccaaacacaaggcagcgcttgattctacgcca
aaagacgctgctcaagatgatcgctatgtagaagaaagagcccagcttgagaagctgtca
ttaggtaacttagtgagtgagcagtcgcccaagcacaatcagccaagcccactatttact
attaatgctgaaaaaatggccaaacaagtgccgcagcagccaggtattgaggcgcaggca
gagttacaggctaccagcgtacaaaatgaggtagaaagtaaagcagcagggcgcaccgag
actgcctctaaacctgctaaagctaagaattctcaaaagcaggagcctcaaaagcaggaa
gctaagctagatcaggctaccgctaaagttcagtcacaggccgtgctattgcctaagtct
gaaccagtacctgccaagcgccgtcgtcgtctacccagtcaagagatgagccagtctgaa
caagcgcaggctaagctcgctaccgctcagccgtcatccactaaagccgacgtaacacca
gctgctaacaacgccgcttctgccgacgctaagtctgccaaagcaaaaaagcctgccaat
aacagtaacagtaaagctgctgagacattagttgaggtccccgctaatagcgaaacgaga
gttgatagcgaaaccagaaaggctaagccggaagtagcaaaaaaacggtcaaagccggca
gcaacccttgatgtgaatagtctaattgcaaaaagtgagcgggttcctgccacacgtcgt
cgtcgtcaaccaagctcgatgcttagtgtgagcgaaacaagccagtcgtaa
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