Psychrobacter sp. YP14: DLE54_11235
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Entry
DLE54_11235 CDS
T05488
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
psyy
Psychrobacter sp. YP14
Pathway
psyy00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
psyy00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DLE54_11235
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
psyy01007
]
DLE54_11235
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psyy03016
]
DLE54_11235
Enzymes [BR:
psyy01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
DLE54_11235
Amino acid related enzymes [BR:
psyy01007
]
Aminoacyl-tRNA synthetase
Class II (U)
DLE54_11235
Transfer RNA biogenesis [BR:
psyy03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
DLE54_11235
Prokaryotic type
DLE54_11235
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
MlaD
Motif
Other DBs
NCBI-ProteinID:
AWT50015
LinkDB
All DBs
Position
complement(2718537..2720948)
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AA seq
803 aa
AA seq
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MKISEQWLREWVNPNNDTQALADQLTMAGLEIDDIEAVAADFSGVVVGEVISVEQHPDAD
KLRVTQVNINSDAPLQIVCGAPNVRVGMRAPVAIIGAKLPTADGQGFKIKKSKLRGVESQ
GMLCGASEIDLPDVVDGLLELPDDAPIGTDIREYLGLDNKILDISITPNRGDCFSVRGIA
REIGVINGLPITAPEVTAQADEVQASQAVTVEATEACPRYLAQPVLEIDRSIETPDWMQK
SLLQSGQRLHNFLVDVTNYVLLELGQPLHAFDADKIVGDIQVRMAKAGEQLELLNEQTVT
LTGDELVIADDQGILALAGIMGGMRSSVSDSTTNIVLESAFFDQLAIAGRARRFGLHTDA
SQRFERGVDFELPLTALRRAVNLISSIAHGKAGQITVIEHSDKLPKRVPVQLPFNKVAEV
IGIEIEKQRIIDILTQLEIDVEVSEQDGNTVFNCLPPSHRFDIEIKEDLIEEIARIYGYD
NIPSTLPKLGVDMRYDDTADLTHRLKLAMVDAGYMEAISFSFSDEKIENILDDVNLGNLL
ALANPISSDLAVMRRTLLSSLIPCVQYNLNRQQPRVRFFETGLSFVGATIDELVQTPSLA
IVATGDVYPEQAHSNRAMDFFDLKHDVEQLLPATLDESRISYQRSELAFLHPGQSAELLI
DGEVVGWLGQLHPSVAQKLDLPSTWVAQLALAPILGQARAVQSITSPSKFPQVRRDIALL
VDAEVSRQALSQSIRQAGGALLQQHWLFDVYQGEHTPQGMRSVAFALVWQDPAQTLSDDV
VNDAMQKVIAALQTEHGAQLRDS
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattagcgaacaatggttacgcgagtgggtaaaccccaataatgatacccaagct
ttggccgaccaattaaccatggcaggccttgagattgatgatatcgaagcggtcgctgcc
gactttagtggtgtggttgtgggcgaggttatcagtgttgagcaacatccagacgctgac
aaattacgagtgactcaggtcaatatcaactctgatgcgccgctacaaatcgtctgcggt
gcgcccaatgtacgagtcggtatgcgagcgcctgtggccatcatcggtgccaagctgcct
accgcagatggtcaaggctttaaaattaaaaaaagcaagctgcgcggtgtggaatcacaa
ggtatgctgtgcggggcatcagaaattgatctgcctgatgtggtagatggtttgcttgag
ctgccagatgatgcgcccatcggcacagacattcgtgagtatctgggtctggacaataag
atattagacatctcaattaccccaaaccgtggtgattgctttagtgtgcgcggtatcgcc
cgtgaaattggcgtcattaatggtttgccaattaccgccccagaggttacggctcaagcc
gatgaagtacaagcatcacaagcagtaactgttgaggctaccgaggcgtgcccacgttac
ttagcgcagcctgtacttgagattgaccgtagtattgagacaccagattggatgcaaaag
tccttattacaaagtggtcagcgtttacataatttcttagtagatgtgaccaactatgtc
ctattagagctgggtcagccgttacatgcttttgatgccgataagattgtgggcgatatt
caagtacgtatggccaaagctggcgaacagttggagctgcttaatgagcagaccgtaact
ttgacaggtgacgagttggttatcgcggatgaccaaggcatcttggccttagcgggtatt
atgggtggtatgcgaagtagtgtgagcgatagcaccaccaatattgtgttagaaagtgca
ttttttgatcaattggccatagccggtcgtgctcgccggtttggcttacatacggatgcc
tcacagcgcttcgagcgtggggtggactttgagctgccattgacggcgctgcgccgtgca
gtaaatttaatcagcagcatagctcacggcaaagccggtcaaattaccgtcattgaacac
agtgataaactgccaaaacgggtacccgtacagctgccttttaataaagttgcagaagtt
attggcattgagatagaaaaacagcgtattattgacatactcactcagcttgagattgac
gttgaagtgagcgagcaagatggcaataccgtatttaattgcttgccaccaagccaccgc
tttgatattgaaatcaaagaagatttgattgaagagattgcccgcatctacggctatgac
aatattccaagtaccttgcctaagctaggcgtggacatgcgttatgatgacaccgctgac
ttaacccatcgcttaaaactggcgatggtagatgccggttatatggaagccatcagcttt
agctttagtgatgaaaagattgaaaatatcttagatgacgtcaatttgggtaacttattg
gcattggccaatcccatttcatcagatttagccgtcatgcgtcgcaccttgctatcaagc
ctaatcccttgtgtgcaatataatttgaaccgtcagcagcctcgggtgcgtttctttgag
acgggtctaagctttgtgggggctaccatagatgaactggtgcaaacgccaagcttagct
attgtggccacaggtgatgtatatcctgaacaggcgcacagcaatcgtgctatggacttc
ttcgaccttaagcatgatgttgagcagttgctacctgcaacactggatgaatcacgtatc
agctatcagcgtagtgagttggcatttttacacccaggccaaagtgctgagctgttaatt
gatggtgaagtggtgggctggctgggtcaattacaccccagtgtggcacagaaacttgat
ttaccaagcacttgggtggcgcagttggcattggccccaattttgggtcaagcgcgcgct
gttcaaagcatcactagcccatcgaagttcccccaagtgcgccgagatattgctttattg
gtggatgctgaagtttcacgtcaggccttgtctcaaagcattcgccaagctggtggcgcg
ttattgcaacagcattggttatttgatgtttatcaaggtgagcatacaccacagggcatg
cgttcagtagcctttgccttagtatggcaagaccctgctcagactttatctgatgacgtg
gtcaatgatgcgatgcaaaaagtgattgctgcactacaaactgagcatggggcacagtta
agagacagctaa
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