Stutzerimonas stutzeri ATCC 17588 = LMG 11199: PSTAB_0168
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Entry
PSTAB_0168 CDS
T01571
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
psz
Stutzerimonas stutzeri ATCC 17588 = LMG 11199
Pathway
psz03030
DNA replication
psz03410
Base excision repair
psz03420
Nucleotide excision repair
psz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSTAB_0168 (polA)
03410 Base excision repair
PSTAB_0168 (polA)
03420 Nucleotide excision repair
PSTAB_0168 (polA)
03440 Homologous recombination
PSTAB_0168 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psz03032
]
PSTAB_0168 (polA)
03400 DNA repair and recombination proteins [BR:
psz03400
]
PSTAB_0168 (polA)
Enzymes [BR:
psz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSTAB_0168 (polA)
DNA replication proteins [BR:
psz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PSTAB_0168 (polA)
DNA repair and recombination proteins [BR:
psz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PSTAB_0168 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PSTAB_0168 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
WHD_BrxR
Motif
Other DBs
NCBI-ProteinID:
AEJ03449
UniProt:
F8H4C1
LinkDB
All DBs
Position
186731..189475
Genome browser
AA seq
914 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLTTSTGKPTGAVKGVLNMLLSLRKQYPDSPFAVVFD
AKGPTFRDALFENYKSHRPPMPDDLRVQVEPLHASVRALGLPLLCVEGVEADDVIGTLAR
QCAALGRDVVISTGDKDMAQLVCPHVTLVNTMTGSVYDIEGVKAKFGVGPELIIDFLALM
GDKVDNIPGVPGVGEKTACGLLNGIPGGLKGLYEHLDQVAGLPIRGAKSLGAKLEEHRDA
AFMSYELATIKIDVALDVEVGDLMPGEPHREALIALYRELEFKQWLDELLREAKAAGENC
EVQPEGCSIQAEAQYETLLEQADFERWLARLKAAECFAFDTETTSLDAQRAELVGVSFAV
EPGQAAYVPLRHSYMGVPQQLELDAVLGALKPLLEDPAKTKICQHGKYDMNVLMHYGIEM
RGMAFDTMLESYVLDATATRHDMDSLALKYLGRGTIRFEDIAGKGAKQLTFDQIAIEQAG
PYAAEDADVTLRLHQTLLGKLEQTPSLLRVLTEIEMPLVPVLARIERNGALVDAQLLGQQ
SVELGDKLVQLEREAFDIAGEEFNLGSPKQLCAILYDKLGCPVISKTAGGQPSTAESVLA
ELAEQDYPLPKVIMQHRSLSKLKGTYTDKLPQQINPRTGRIHTSYHQAVTATGRLSSSDP
NLQNIPIRTAEGRRIRQAFVAAPGYKLLAADYSQIELRIMAHLAQDAGLLHAFQNDLDVH
RATAAEVFGVPLEQVSNDQRRSAKAINFGLIYGMSAFGLAKQIDVGRKEAQEYIDRYFAR
YPGVLAYMERTRTQAAEQGYVETLFGRRLYLPEINSKNGAMRKGAERTAINAPMQGTAAD
IIKRAMIAVDGWLQDSGLDARVILQVHDELVLEVREDLVEQVREAICPLMSGAAQLDVPL
LVEAGVGNNWDEAH
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcccccctcgtcctggtggacggttcgtcctacctgtaccgcgccttccac
gcgctgcctccgctgaccacctctaccggcaagccgaccggtgcggtcaagggtgtgctg
aatatgttactgagcctgcgcaaacagtatccggacagcccgttcgccgtggttttcgac
gccaagggtccgacctttcgcgacgcgctgttcgagaactacaagtcgcaccgcccgccg
atgcccgacgacctgcgcgtgcaggtcgagccgctgcatgccagcgtccgtgcactgggg
ctgccgctgctgtgcgtagaaggggtcgaggccgacgacgtcatcggcaccctggcgcgg
caatgcgcggcgctgggccgtgatgtggtgatctccaccggcgacaaggacatggcccag
ctggtctgcccgcacgtcaccctggtcaacaccatgaccggcagcgtctatgacatcgag
ggcgtgaaggccaagttcggcgtcggcccggaactgatcatcgacttcctcgcgctgatg
ggcgacaaggtcgacaacattcctggcgtgccaggcgtgggcgagaagacggcatgtggc
ctgctcaacggcatcccgggcgggctcaaggggctctacgagcacctcgaccaggtcgcc
gggctgcctattcgcggtgccaagtcgttgggcgccaagctggaggagcatcgcgatgcc
gccttcatgtcctacgagctggctacgatcaagatcgacgtggcgctggacgtcgaggtc
ggtgacctgatgcccggggagccgcaccgcgaggcgctgatcgccctttatcgcgagctg
gagttcaagcagtggctggacgagctgctgcgcgaggccaaggcggcgggggagaactgc
gaggtgcagccagaaggctgttcgatccaggccgaggcccagtacgagaccctactggag
caggccgatttcgagcgctggctggcgcgtctgaaggcggccgaatgttttgccttcgat
accgaaaccaccagcctcgatgcgcagcgcgccgagctggtcggcgtgtctttcgccgtg
gagccgggccaggcggcttacgtgccgctgcgccattcctacatgggcgtgccgcagcag
ctcgagctggatgccgtgctcggcgcgctcaagccgctgctggaagatccggccaagacc
aagatctgccagcacggcaaatacgacatgaacgtgctgatgcactacggcatcgagatg
cgcggcatggctttcgacaccatgctcgaatcctacgtgctggacgccaccgccactcgc
cacgacatggacagtctggcgctcaagtacctcggccgcggcaccatccgcttcgaggac
attgccggcaagggcgccaagcagctgaccttcgaccagatcgccatcgagcaggccggc
ccgtacgccgccgaggacgccgacgtcaccctgcgcctgcaccagaccctgctcggcaag
ctggagcagacgccatcgctgctcagggtgctgaccgagatcgagatgccgctggtgccg
gtgctggcgcgcatcgagcgcaacggcgcgctggtcgatgcacagttgcttggccagcag
agcgtcgagctgggcgacaagctggtgcagctggaacgcgaggcgttcgacatcgctggc
gaggagttcaacctcggctcgcccaagcagctctgcgcgattctctacgacaagctcggc
tgcccggtgatctccaagaccgccggcggccagccgtcaacggccgagagcgtgctggcc
gaactggccgagcaggattacccgctgccaaaggtcatcatgcagcaccgcagcctgagc
aagctcaagggcacctacaccgacaagctgccgcagcagatcaacccgcgcaccgggcgc
atccacaccagctaccaccaggcggtgaccgccaccggccggctgtcctccagcgacccg
aacctgcagaacatcccgatccgcaccgccgaggggcggcgcattcgccaggccttcgtc
gcggcgccgggctacaagctgctggcggcggactactcgcagatcgagctgcgtatcatg
gcccacctggcgcaggatgccggcctcttgcacgcgttccagaacgacctggacgtgcac
cgcgccacggccgccgaggtgttcggcgtaccgctggagcaggtcagcaacgaccagcgc
cgcagcgccaaggccatcaacttcggcctgatctacggcatgagcgccttcggcctggcc
aagcagatcgacgtcggccgcaaggaagcgcaggagtacatcgaccgctatttcgcccgc
taccccggcgtgctcgcctacatggagcgcacccgcacccaggccgcggagcagggctat
gtcgagacactgttcggtcgccggctgtacctgccggagatcaactcgaagaacggcgcc
atgcgcaagggcgccgagcgcaccgcgatcaacgcgccgatgcagggcaccgcagcggac
atcatcaagcgcgccatgatcgccgtggacggctggctgcaggacagcgggctggatgcg
cgggtgatcctgcaggtccacgatgaattggtgctggaagtgcgcgaagacctggtcgaa
caggtccgcgaagccatctgcccgctgatgagcggggccgcccagctggacgtgccgctg
ctggtcgaggcgggggttggcaacaactgggacgaggcgcactga
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