Stutzerimonas stutzeri ATCC 17588 = LMG 11199: PSTAB_0664
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Entry
PSTAB_0664 CDS
T01571
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
psz
Stutzerimonas stutzeri ATCC 17588 = LMG 11199
Pathway
psz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
psz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PSTAB_0664 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psz03021
]
PSTAB_0664 (rpoC)
03400 DNA repair and recombination proteins [BR:
psz03400
]
PSTAB_0664 (rpoC)
Enzymes [BR:
psz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PSTAB_0664 (rpoC)
Transcription machinery [BR:
psz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PSTAB_0664 (rpoC)
DNA repair and recombination proteins [BR:
psz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PSTAB_0664 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
ApbA_C
DUF3150
PPDFL
Motif
Other DBs
NCBI-ProteinID:
AEJ03945
UniProt:
F8H9T0
LinkDB
All DBs
Position
736670..740869
Genome browser
AA seq
1399 aa
AA seq
DB search
MKDLLNLLKNQGQIEEFDAIKIALASPEMIRSWSFGEVKKPETINYRTFKPERDGLFCAK
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVALAKVRRERMAHIELASPVAHIWFLKSL
PSRIGLLLDMTLRDIERVLYFESYVVIDPGMTTLEKGQLLNDEQYFEALEEFGDDFDARM
GAEAVRELLIQIDLEHEIGRLREEIPQTNSETKIKKLSKRLKLMEAFHGSGNLPEWMILT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLSAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPT
LRLHQCGLPKKMALELFKPFIFGKLEMRGMATTIKAAKKMVERELPEVWDVLAEVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA
RALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTREAINAKGEGRVFADLQEVDRVFRAG
EASLHARVKVRINETIKDRDGSITKNTRIVDTTVGRALLFQIVPEGMSFDVVNQPMKKKA
ISKLINLCYRTVGLKDTVIFADQLMYTGFAYSTISGVSIGVNDFVIPDEKARIIDAATEE
VKEIESQYASGLVTQGEKYNKVIDLWSKANDEVSKAMMANLSKEKVIDREGNEAEQDSFN
SMYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVVTEIDCGTEQGLHMTPHIEGGDVVEPLGERVL
GRVIARDVLKPGTDDVLVPAGTLIDEQWVDFIELNSIDEVIVRSPISCETRYGICAKCYG
RDLARGHQVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRTSAVDNVLVKNGGTIRL
HNLKHVERADGALVAVSRSGELAVADDFGRERERYKLPYGAVISVKEGDKVDAGAVVAKW
DPHTHPIVTEMKGVVTFVGMEENITIKRQTDELTGLTNIEVMDPKDRPAAGKDIRPAIKM
VDANGKELLLPGTDVPAQYFLPANALVGVADGSEINVGDVIARIPQETSKTRDITGGLPR
VADLFEARRPKEPSILAEISGTISFGKETKGKRRLVITPTDGSDPYEELIPKWRHLNVFE
GEQVNKGEVISDGPSNPHDILRLLGVSALARYIVNEIQDVYRLQGVKINDKHIETILRQM
LRKVEITESGDSSFIKGDQMELTQVLEENERLSAEDKFVAKYVRVLLGITKASLSTESFI
SAASFQETTRVLTEAAVTGKRDYLRGLKENVVVGRLIPAGTGLAYHSERKRKRDAEKPVR
VSADEVEAALTEALNSSGN
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagacttgctgaatctgttgaaaaaccagggtcaaatcgaagagttcgatgccatc
aagattgccctggcgtcccccgagatgatccgttcctggtccttcggtgaagtgaagaag
ccggagaccatcaactaccgtacgttcaagcccgagcgtgacggccttttctgcgccaag
atctttggcccggtcaaggactacgagtgcctgtgcggcaagtacaagcgcctcaagcat
cgcggtgtgatctgcgagaagtgtggtgtggaagttgcgctggccaaggtgcgtcgcgag
cgcatggcgcacatcgaactggcttctccggtcgcgcacatctggttcctgaagtcgctg
ccgtcccgtatcggcctgctgctggacatgaccctgcgcgatatcgagcgcgtgctctat
ttcgagagctacgtggtgatcgatccgggcatgaccactctggagaaaggtcagctgctt
aacgacgagcagtacttcgaagccctcgaagagttcggtgacgacttcgatgcccgcatg
ggtgccgaggctgtccgcgagctgctgatccagatcgacctggagcacgagattggccgt
ttgcgcgaggaaattccgcagaccaactcggaaaccaagatcaagaagctctccaagcgt
ctgaagctgatggaggctttccatggctcgggcaacctgccggagtggatgatcctgacc
gtgctgccggtgctgccgccggatctgcgtccgctggttccgctggatggcggtcgtttc
gcgacttcggatctgaacgatctgtatcgccgcgtgatcaaccgcaacaaccgtctgaag
cgcctgctcgacctgtcggcgccggatatcatcgtgcgcaacgaaaagcgcatgctgcag
gaagcggtcgatgcgctgctggacaacggccgccgcggccgcgccatcaccggttcgaac
aagcgcccgctgaagtccctggctgacatgatcaagggcaagcagggtcgtttccgtcag
aacctgctcggcaagcgcgtggactactccggtcgttccgtgatcaccgtaggtccgacc
ctgcgtctgcaccagtgcggcctgccgaagaagatggcgctcgagctgttcaagccgttc
atcttcggcaagctggaaatgcgcggcatggccaccaccatcaaggcggccaagaagatg
gtcgagcgcgagctgccggaagtctgggacgttctcgccgaagtgattcgcgagcatccc
gtactgctcaaccgcgcaccgaccctgcaccgtctgggtatccaggcgttcgagccggta
ctgatcgaaggcaaggcgatccagctgcacccgctggtctgtgccgcgtacaacgccgac
ttcgacggtgaccagatggccgtgcacgtgccgctgacgctggaagctcagctggaagcg
cgcgcgctgatgatgtcgaccaacaacatcctctcgccagccaacggtgagccgatcatc
gttccgtcgcaggacgtggttctgggtctatactacatgacccgtgaagccatcaatgcc
aagggcgaagggcgcgtgttcgccgacctgcaggaagtcgaccgcgtgttccgcgccggt
gaagcctcgctgcacgcccgggtcaaggtgcgcatcaacgagaccatcaaggatcgtgac
ggcagcatcaccaagaacacccgcatcgtcgacaccaccgtcggccgcgcgctgctgttc
cagatcgtgccggaagggatgtcattcgacgtcgtcaaccagccgatgaagaaaaaggcg
atctccaagctgatcaacctgtgctaccgcaccgttggtctgaaggatactgtcatcttc
gccgaccagctgatgtacaccggcttcgcctactcgaccatttccggtgtttcgatcggt
gtgaacgatttcgtcatcccggacgagaaggcgcgcatcatcgatgcggccaccgaagaa
gtgaaggagatcgaatcgcagtacgcctccggcctggttacccagggcgagaagtacaac
aaggtgatcgacctctggtccaaggccaacgacgaagtgtccaaggccatgatggccaac
ctctcgaaagagaaggtcatcgaccgcgaaggcaacgaagccgagcaggattcgttcaac
tcgatgtacatgatggccgactccggtgcgcggggttccgcggctcagattcgccagctg
gccggtatgcgtggcctgatggccaagccggacggctccatcatcgaaacgccgattacg
gcgaacttccgtgagggtctgaacgtactgcagtacttcatctccacgcacggtgctcgt
aagggtctggcggataccgcactgaaaaccgcgaactccgggtacctgactcgtcgtctg
gtggatgtcgcgcaggatctggtggtcaccgagatcgattgcggcaccgagcagggtctg
cacatgactccgcacatcgaaggcggcgacgtggtcgagccgctgggcgagcgcgtgctg
ggtcgcgtgattgcgcgtgacgtgctcaagccgggcaccgatgacgtgctggttccggcg
ggtacgttgatcgacgagcagtgggtcgactttatcgagctgaacagcatcgacgaagtg
atcgtgcgctcgccgatctcctgtgaaacccgctacggcatctgtgccaagtgctacggt
cgtgatctggcccgtgggcatcaggtcaacatcggcgaggcggtcggcgttatcgctgcc
cagtcgatcggtgagccgggtactcagctcaccatgcgtacgttccacatcggtggtgcg
gcgagccgtacctcggccgtcgacaacgtgctggtgaagaacggcggtaccatccgcctg
cataacctgaagcacgtcgagcgtgccgatggcgcgctggtggccgtgtctcgttccggc
gagctggccgtggcggacgacttcggtcgtgagcgcgagcgctacaagctgccgtacggt
gctgtgatttccgtgaaggaaggcgacaaggtcgacgctggcgccgtggttgccaagtgg
gacccgcacacccacccgatcgtgaccgaaatgaagggtgtcgtgaccttcgttggcatg
gaggagaacatcaccatcaagcgccagaccgacgagctgaccggtctgaccaacatcgag
gtgatggatccgaaggaccgtccggcagcaggcaaggacatccgtccggcgatcaagatg
gtcgacgccaatggcaaggagttgttgctgccaggtaccgacgtaccggcccagtacttc
ctgccggctaacgcgctggtcggtgttgcggacggctccgagatcaatgtgggtgacgtc
atcgcacgtatcccacaggaaacctcgaagacccgcgacatcaccggtggtctgccgcgc
gttgccgacctgttcgaagcgcgtcgtccgaaggagccgtccatcctggcggaaatcagc
ggcacgatttccttcggtaaggaaaccaagggcaagcgtcgcctggtgattacgccgacc
gacggtagcgatccgtacgaagagctgattccgaagtggcgtcacctgaacgtcttcgaa
ggcgaacaggtgaacaagggtgaagtgatctccgacggcccgagcaacccgcacgacatt
ctgcggctgttgggcgtcagcgcactggcacgctacatcgtcaacgagatccaggacgtt
taccgactgcagggcgtgaagatcaacgacaagcacatcgagaccatcctgcggcagatg
ctgcgcaaggtcgagatcaccgagtcgggcgattccagcttcatcaagggcgaccagatg
gaactgacccaggtgctggaagagaacgagcgtctgagcgcagaggacaagttcgtcgcc
aagtacgtccgcgtcctgctgggcatcaccaaggcgtcgttgtcgaccgagtcgttcatc
tccgcggcctcattccaggagaccacccgcgtgctgaccgaagcggccgtgactggcaag
cgcgactacctgcgcggcctgaaggagaacgtggttgtgggtcgtctgatcccggccggt
accggtctggcgtatcacagcgagcgcaagcgcaagcgtgatgccgagaagccggtccgc
gtgagtgccgatgaagtcgaggcggcgctgactgaagcgctgaactccagcggcaattga
DBGET
integrated database retrieval system
