Stutzerimonas stutzeri ATCC 17588 = LMG 11199: PSTAB_0933
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Entry
PSTAB_0933 CDS
T01571
Symbol
ntrA
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
psz
Stutzerimonas stutzeri ATCC 17588 = LMG 11199
Pathway
psz02020
Two-component system
psz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
psz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PSTAB_0933 (ntrA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PSTAB_0933 (ntrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psz03021
]
PSTAB_0933 (ntrA)
Transcription machinery [BR:
psz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PSTAB_0933 (ntrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Acyl-CoA_dh_C
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AEJ04214
UniProt:
F8GZV1
LinkDB
All DBs
Position
complement(1001571..1003055)
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AA seq
494 aa
AA seq
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MGQQLTMTPQLQQAIRLLQLSTLDLQQEIQEALDSNPMLEREEDGDDFDGSDPMAKAVDR
SSDAGSEKISTQESTYEEPSHSGEGLDEADWGERIPSELPVDTAWEDIYQTSASNLPSND
DDEWDFTSRTSSGVSLQSHLLWQLNLAPMSDTDRLIATTLIDCINDQGYLEESLQEIVDS
FDPELEIELDEVEVVLRRVQQFEPAGIGARDLRECLLLQLRQLPDRTPWLSEAQRLVSDH
LNLLGSRDYSLLMRRMKLKEDELRQVIELIQSLNPRPGSQIEASEPEYVVPDVIVRKHND
RWLVELNQDAMPRLRVNAQYASFVKRADSSADNTFMRNQLQEARWFIKSLLSRNETLMKV
ATQIVEHQRAFLEHGDEAMKPLVLHDIAEAVGMHESTISRVTTQKYMHTPRGIYELKYFF
SSHVSTAEGGECSSTAIRAIIKKLVAAENPKKPLSDSKIAGLLEAQGIQVARRTVAKYRE
SLGIAPSSERKRLL
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgggccagcagctgacgatgacaccgcagctgcaacaggccatacggctcctccagctt
tccaccctcgatctgcaacaggagatccaggaagcgctggactccaatcccatgctcgag
cgtgaagaggacggtgacgacttcgacggctccgaccccatggccaaggccgtcgatcgt
tcgagcgacgctggtagcgaaaagatcagcactcaggaaagcacctatgaagagccttcg
cacagcggcgaaggcctcgacgaggccgactggggtgagcgcattcccagcgagctaccc
gtcgacaccgcctgggaagacatttaccagaccagcgccagcaacctgccgagcaacgac
gacgacgaatgggacttcaccagccgtacctccagcggtgtcagcctgcagagccatctg
ctgtggcagctcaacctcgcccccatgagcgacaccgaccgcctgatcgccaccacactg
atcgactgcatcaacgatcagggctatctcgaggagtctctgcaggaaatcgtggacagc
ttcgacccggagcttgaaatcgagctcgacgaggtcgaagtcgtgctgcgccgcgtacag
cagttcgaacctgccggtatcggcgcacgggatctgcgcgaatgcctgctcctgcagctg
cgccagctccctgaccgcaccccttggctcagcgaagcccagcggctggtgagtgaccat
ctgaacctgttgggtagccgcgactacagcctgctgatgcgccgcatgaagctcaaggaa
gacgagctgcgccaggtcatcgagctcatccagagcctcaacccgcgcccgggctcgcag
atcgaggcgagcgagccggagtacgtggtgccggacgtcatcgtacgcaagcacaacgat
cgctggttggtggagctcaaccaggacgccatgccccgacttcgcgtcaatgcccagtac
gccagcttcgtaaagcgcgccgattcgagtgccgacaataccttcatgcgcaaccagctg
caggaagcgcgctggttcatcaagagcctgctcagtcgcaacgaaacactgatgaaggtc
gccacccagatcgtcgagcaccagcgtgccttcctcgaacacggcgacgaggcgatgaag
ccgctggtgctgcacgacatcgccgaagccgtggggatgcatgagtcgacgatttcccgc
gtcaccacgcagaaatacatgcatacgccgcgtggcatctacgaactcaaatacttcttc
tccagccacgtcagcacggcggaaggcggcgaatgttcgtccaccgcgatccgcgcgatc
atcaagaagctggtcgccgcggaaaacccgaaaaagccgttgagcgacagcaagatcgct
ggtttactggaggcgcagggcatccaggtggcccgccgcaccgttgcgaaataccgcgag
tcgctcggtatcgcaccgtccagcgagcgtaaacgattgctgtga
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